Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH16O75309 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH16O75309 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH16O75309 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH16O75309 MYADML-201ENST00000474610 2147 ntBASIC15.13■□□□□ 0.01
CDH16O75309 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH16O75309 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
CDH16O75309 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
CDH16O75309 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH16O75309 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CDH16O75309 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH16O75309 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH16O75309 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH16O75309 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH16O75309 AC099521.3-201ENST00000624251 2938 ntBASIC15.12■□□□□ 0.01
CDH16O75309 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CDH16O75309 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH16O75309 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH16O75309 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.12■□□□□ 0.01
CDH16O75309 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH16O75309 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
CDH16O75309 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CDH16O75309 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH16O75309 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
CDH16O75309 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH16O75309 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.12■□□□□ 0.01
CDH16O75309 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.12■□□□□ 0.01
CDH16O75309 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CDH16O75309 AC023141.5-201ENST00000458585 616 ntBASIC15.12■□□□□ 0.01
CDH16O75309 RN7SL618P-201ENST00000477850 296 ntBASIC15.12■□□□□ 0.01
CDH16O75309 SDHAP3-202ENST00000515467 728 ntBASIC15.12■□□□□ 0.01
CDH16O75309 AC010336.2-201ENST00000564226 506 ntBASIC15.12■□□□□ 0.01
CDH16O75309 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
CDH16O75309 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH16O75309 AL596442.2-201ENST00000610240 980 ntBASIC15.12■□□□□ 0.01
CDH16O75309 AL109936.8-201ENST00000641772 604 ntBASIC15.12■□□□□ 0.01
CDH16O75309 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH16O75309 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH16O75309 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH16O75309 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH16O75309 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH16O75309 TUBB3P1-201ENST00000405796 1332 ntBASIC15.12■□□□□ 0.01
CDH16O75309 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH16O75309 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH16O75309 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH16O75309 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH16O75309 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.11■□□□□ 0.01
CDH16O75309 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH16O75309 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CDH16O75309 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.11■□□□□ 0.01
CDH16O75309 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH16O75309 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CDH16O75309 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH16O75309 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.11■□□□□ 0.01
CDH16O75309 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CDH16O75309 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
CDH16O75309 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH16O75309 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CDH16O75309 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CDH16O75309 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH16O75309 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CDH16O75309 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH16O75309 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH16O75309 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.11■□□□□ 0.01
CDH16O75309 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.11■□□□□ 0.01
CDH16O75309 AL353779.1-201ENST00000434793 351 ntBASIC15.11■□□□□ 0.01
CDH16O75309 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH16O75309 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH16O75309 HLA-V-204ENST00000476601 1289 ntBASIC15.11■□□□□ 0.01
CDH16O75309 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH16O75309 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.11■□□□□ 0.01
CDH16O75309 AC051619.7-201ENST00000568314 623 ntBASIC15.11■□□□□ 0.01
CDH16O75309 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH16O75309 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.11■□□□□ 0.01
CDH16O75309 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.11■□□□□ 0.01
CDH16O75309 AP001059.3-201ENST00000619053 235 ntBASIC15.11■□□□□ 0.01
CDH16O75309 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.11■□□□□ 0.01
CDH16O75309 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CDH16O75309 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH16O75309 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH16O75309 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CDH16O75309 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC15.11■□□□□ 0.01
CDH16O75309 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.11■□□□□ 0.01
CDH16O75309 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH16O75309 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH16O75309 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH16O75309 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH16O75309 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH16O75309 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC15.11■□□□□ 0.01
CDH16O75309 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH16O75309 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH16O75309 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH16O75309 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH16O75309 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.1■□□□□ 0.01
CDH16O75309 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH16O75309 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH16O75309 AC027612.1-201ENST00000445234 2395 ntBASIC15.1■□□□□ 0.01
CDH16O75309 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CDH16O75309 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH16O75309 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms