Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
O00370 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
O00370 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.92■□□□□ 0.14
O00370 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
O00370 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.92■□□□□ 0.14
O00370 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.92■□□□□ 0.14
O00370 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
O00370 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.92■□□□□ 0.14
O00370 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
O00370 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
O00370 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
O00370 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
O00370 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
O00370 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
O00370 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
O00370 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
O00370 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.91■□□□□ 0.14
O00370 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
O00370 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
O00370 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
O00370 AC006001.1-201ENST00000325130 474 ntBASIC15.91■□□□□ 0.14
O00370 ANKRD19P-201ENST00000338192 862 ntBASIC15.91■□□□□ 0.14
O00370 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
O00370 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
O00370 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.91■□□□□ 0.14
O00370 CD8B2-202ENST00000417670 633 ntBASIC15.91■□□□□ 0.14
O00370 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.91■□□□□ 0.14
O00370 TLE1P1-201ENST00000422965 589 ntBASIC15.91■□□□□ 0.14
O00370 AC007969.1-201ENST00000433675 447 ntBASIC15.91■□□□□ 0.14
O00370 ACA64.2-201ENST00000459014 129 ntBASIC15.91■□□□□ 0.14
O00370 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.91■□□□□ 0.14
O00370 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.91■□□□□ 0.14
O00370 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.91■□□□□ 0.14
O00370 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.91■□□□□ 0.14
O00370 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.91■□□□□ 0.14
O00370 AC138696.2-201ENST00000607376 223 ntBASIC15.91■□□□□ 0.14
O00370 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
O00370 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
O00370 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.91■□□□□ 0.14
O00370 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
O00370 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
O00370 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
O00370 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.91■□□□□ 0.14
O00370 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
O00370 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
O00370 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
O00370 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.91■□□□□ 0.14
O00370 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.91■□□□□ 0.14
O00370 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
O00370 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
O00370 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
O00370 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
O00370 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
O00370 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.91■□□□□ 0.14
O00370 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
O00370 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
O00370 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
O00370 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
O00370 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.9■□□□□ 0.14
O00370 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
O00370 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.9■□□□□ 0.14
O00370 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
O00370 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.9■□□□□ 0.14
O00370 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.9■□□□□ 0.14
O00370 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
O00370 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
O00370 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
O00370 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
O00370 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.9■□□□□ 0.14
O00370 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
O00370 MIR1909-201ENST00000411312 80 ntBASIC15.9■□□□□ 0.14
O00370 AC234783.1-201ENST00000441761 496 ntBASIC15.9■□□□□ 0.14
O00370 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.9■□□□□ 0.14
O00370 FTLP10-202ENST00000505798 471 ntBASIC15.9■□□□□ 0.14
O00370 AL391280.1-201ENST00000506969 1062 ntBASIC15.9■□□□□ 0.14
O00370 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
O00370 AP003171.2-201ENST00000528208 925 ntBASIC15.9■□□□□ 0.14
O00370 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.9■□□□□ 0.14
O00370 HILS1-202ENST00000545329 423 ntBASIC15.9■□□□□ 0.14
O00370 SNX29P1-201ENST00000548357 1007 ntBASIC15.9■□□□□ 0.14
O00370 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.9■□□□□ 0.14
O00370 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
O00370 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.9■□□□□ 0.14
O00370 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
O00370 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.9■□□□□ 0.14
O00370 AC006453.4-201ENST00000636949 1252 ntBASIC15.9■□□□□ 0.14
O00370 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
O00370 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
O00370 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
O00370 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
O00370 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.9■□□□□ 0.14
O00370 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
O00370 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
O00370 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.9■□□□□ 0.14
O00370 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
O00370 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
O00370 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
O00370 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
O00370 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.9■□□□□ 0.14
O00370 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms