Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.14□□□□□ -0.15
UPK1AO00322 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
UPK1AO00322 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.14□□□□□ -0.15
UPK1AO00322 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
UPK1AO00322 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1AO00322 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1AO00322 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.14□□□□□ -0.15
UPK1AO00322 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1AO00322 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1AO00322 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
UPK1AO00322 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1AO00322 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.14□□□□□ -0.15
UPK1AO00322 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.14□□□□□ -0.15
UPK1AO00322 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1AO00322 TMEM198B-204ENST00000484016 896 ntBASIC14.14□□□□□ -0.15
UPK1AO00322 AC022616.1-201ENST00000518688 554 ntBASIC14.14□□□□□ -0.15
UPK1AO00322 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1AO00322 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.14□□□□□ -0.15
UPK1AO00322 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.14□□□□□ -0.15
UPK1AO00322 AC138761.1-201ENST00000584393 385 ntBASIC14.14□□□□□ -0.15
UPK1AO00322 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.14□□□□□ -0.15
UPK1AO00322 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1AO00322 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.14□□□□□ -0.15
UPK1AO00322 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1AO00322 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.14□□□□□ -0.15
UPK1AO00322 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1AO00322 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.14□□□□□ -0.15
UPK1AO00322 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1AO00322 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.14□□□□□ -0.15
UPK1AO00322 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1AO00322 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1AO00322 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1AO00322 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1AO00322 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
UPK1AO00322 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1AO00322 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1AO00322 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1AO00322 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1AO00322 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.14□□□□□ -0.15
UPK1AO00322 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1AO00322 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1AO00322 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
UPK1AO00322 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1AO00322 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1AO00322 PPT1-213ENST00000641319 2388 ntBASIC14.14□□□□□ -0.15
UPK1AO00322 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.13□□□□□ -0.15
UPK1AO00322 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1AO00322 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.13□□□□□ -0.15
UPK1AO00322 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1AO00322 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.13□□□□□ -0.15
UPK1AO00322 AC090505.1-201ENST00000430515 1834 ntBASIC14.13□□□□□ -0.15
UPK1AO00322 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.13□□□□□ -0.15
UPK1AO00322 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.13□□□□□ -0.15
UPK1AO00322 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
UPK1AO00322 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1AO00322 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.13□□□□□ -0.15
UPK1AO00322 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1AO00322 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
UPK1AO00322 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.13□□□□□ -0.15
UPK1AO00322 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
UPK1AO00322 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.13□□□□□ -0.15
UPK1AO00322 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1AO00322 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1AO00322 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.13□□□□□ -0.15
UPK1AO00322 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.13□□□□□ -0.15
UPK1AO00322 EIF3FP3-201ENST00000434851 1086 ntBASIC14.13□□□□□ -0.15
UPK1AO00322 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.13□□□□□ -0.15
UPK1AO00322 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.13□□□□□ -0.15
UPK1AO00322 AC093433.1-201ENST00000458048 571 ntBASIC14.13□□□□□ -0.15
UPK1AO00322 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1AO00322 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.13□□□□□ -0.15
UPK1AO00322 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1AO00322 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.13□□□□□ -0.15
UPK1AO00322 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.13□□□□□ -0.15
UPK1AO00322 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.13□□□□□ -0.15
UPK1AO00322 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.13□□□□□ -0.15
UPK1AO00322 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1AO00322 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1AO00322 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1AO00322 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
UPK1AO00322 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1AO00322 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1AO00322 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1AO00322 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1AO00322 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1AO00322 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1AO00322 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1AO00322 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.13□□□□□ -0.15
UPK1AO00322 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
UPK1AO00322 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
UPK1AO00322 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
UPK1AO00322 KRT8P24-201ENST00000560290 1559 ntBASIC14.13□□□□□ -0.15
UPK1AO00322 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1AO00322 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1AO00322 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UPK1AO00322 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK1AO00322 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
UPK1AO00322 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
UPK1AO00322 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK1AO00322 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms