Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 AC090616.6-203ENST00000579186 1945 ntBASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 RPL8P2-201ENST00000430538 502 ntBASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 AC026320.2-201ENST00000434379 478 ntBASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 AL109837.1-201ENST00000603272 613 ntBASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 MIR6769A-201ENST00000617340 73 ntBASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 ZBED1P1-201ENST00000502364 1930 ntBASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 C8orf49-201ENST00000525043 1968 ntBASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 AC144522.1-201ENST00000625111 1658 ntBASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.07□□□□□ -0.16
CCDC187A0A096LP49 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 OR2K2-202ENST00000374428 1038 ntBASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 RPS9P1-201ENST00000419943 583 ntBASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 HPGD-203ENST00000422112 805 ntTSL 2 BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 AC087045.2-201ENST00000606279 1003 ntBASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 LINC01783-202ENST00000614408 828 ntBASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 BX284668.2-205ENST00000619677 828 ntBASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms