Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 ZEB2-216ENST00000465308 1071 ntTSL 59.81□□□□□ -0.847e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-205ENST00000419938 1755 ntTSL 2 BASIC9.48□□□□□ -0.897e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-210ENST00000440875 1809 ntTSL 5 BASIC8.96□□□□□ -0.987e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-206ENST00000427902 2236 ntTSL 1 (best)8.88□□□□□ -0.997e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-211ENST00000444559 577 ntTSL 48.59□□□□□ -1.037e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.047e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-240ENST00000637267 2677 ntTSL 58.31□□□□□ -1.087e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC8.27□□□□□ -1.097e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-203ENST00000409211 587 ntTSL 47.69□□□□□ -1.187e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-213ENST00000461784 751 ntTSL 34.71□□□□□ -1.667e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-218ENST00000472146 3837 ntTSL 1 (best)4.58□□□□□ -1.687e-6■■■□□ 16.3
DDX52Q9Y2R4 ZEB2-242ENST00000637591 101 ntTSL 5-0.03□□□□□ -2.417e-6■■■□□ 16.3
DDX52Q9Y2R4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.513e-6■■■□□ 16.2
DDX52Q9Y2R4 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.143e-6■■■□□ 16.2
DDX52Q9Y2R4 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC9.33□□□□□ -0.923e-6■■■□□ 16.2
DDX52Q9Y2R4 CDC42-205ENST00000498236 816 ntTSL 58.98□□□□□ -0.973e-6■■■□□ 16.2
DDX52Q9Y2R4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC27.29■■□□□ 1.962e-7■■■□□ 16.2
DDX52Q9Y2R4 BDH1-205ENST00000432819 955 ntTSL 523.42■■□□□ 1.342e-7■■■□□ 16.2
DDX52Q9Y2R4 BDH1-209ENST00000446746 868 ntTSL 323.42■■□□□ 1.342e-7■■■□□ 16.2
DDX52Q9Y2R4 BDH1-214ENST00000479425 1144 ntTSL 215.59■□□□□ 0.092e-7■■■□□ 16.2
DDX52Q9Y2R4 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.032e-7■■■□□ 16.2
DDX52Q9Y2R4 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.052e-7■■■□□ 16.2
DDX52Q9Y2R4 BDH1-206ENST00000434143 659 ntTSL 314.12□□□□□ -0.152e-7■■■□□ 16.2
DDX52Q9Y2R4 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.322e-7■■■□□ 16.2
DDX52Q9Y2R4 BDH1-213ENST00000477015 595 ntTSL 212.19□□□□□ -0.462e-7■■■□□ 16.2
DDX52Q9Y2R4 SEMA4C-202ENST00000442264 817 ntTSL 324.26■■□□□ 1.471e-6■■■□□ 16.2
DDX52Q9Y2R4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.442e-6■■■□□ 16.2
DDX52Q9Y2R4 KLHDC4-207ENST00000562155 1757 ntTSL 523.52■■□□□ 1.362e-6■■■□□ 16.2
DDX52Q9Y2R4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.32e-6■■■□□ 16.2
DDX52Q9Y2R4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC23.05■■□□□ 1.282e-6■■■□□ 16.2
DDX52Q9Y2R4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC22.06■■□□□ 1.122e-6■■■□□ 16.2
DDX52Q9Y2R4 KLHDC4-202ENST00000316853 1287 ntTSL 1 (best)21.53■■□□□ 1.042e-6■■■□□ 16.2
DDX52Q9Y2R4 KLHDC4-215ENST00000566349 1377 ntTSL 220.62■□□□□ 0.892e-6■■■□□ 16.2
DDX52Q9Y2R4 KLHDC4-217ENST00000566661 2232 ntTSL 519.9■□□□□ 0.782e-6■■■□□ 16.2
DDX52Q9Y2R4 KLHDC4-208ENST00000562261 1065 ntTSL 318.04■□□□□ 0.482e-6■■■□□ 16.2
DDX52Q9Y2R4 KLHDC4-212ENST00000564396 563 ntTSL 517.17■□□□□ 0.342e-6■■■□□ 16.2
DDX52Q9Y2R4 KLHDC4-226ENST00000569747 560 ntTSL 416.21■□□□□ 0.192e-6■■■□□ 16.2
DDX52Q9Y2R4 KLHDC4-214ENST00000565328 582 ntTSL 415.38■□□□□ 0.052e-6■■■□□ 16.2
DDX52Q9Y2R4 KLHDC4-213ENST00000564484 562 ntTSL 512.45□□□□□ -0.422e-6■■■□□ 16.2
DDX52Q9Y2R4 KLHDC4-219ENST00000567513 585 ntTSL 49.04□□□□□ -0.962e-6■■■□□ 16.2
DDX52Q9Y2R4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC30.42■■■□□ 2.463e-7■■■□□ 16.2
DDX52Q9Y2R4 RANBP1-210ENST00000435265 1879 ntTSL 223.06■■□□□ 1.283e-7■■■□□ 16.2
DDX52Q9Y2R4 RANBP1-203ENST00000411892 584 ntTSL 217.69■□□□□ 0.423e-7■■■□□ 16.2
DDX52Q9Y2R4 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC17.26■□□□□ 0.353e-7■■■□□ 16.2
DDX52Q9Y2R4 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.293e-7■■■□□ 16.2
DDX52Q9Y2R4 DAZAP1-207ENST00000589484 3414 ntTSL 213.86□□□□□ -0.198e-7■■■□□ 16.2
DDX52Q9Y2R4 YWHAZ-207ENST00000395958 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.341e-6■■■□□ 16.2
DDX52Q9Y2R4 YWHAZ-216ENST00000521309 1399 ntTSL 2 BASIC12.72□□□□□ -0.371e-6■■■□□ 16.2
DDX52Q9Y2R4 YWHAZ-212ENST00000480304 2247 ntTSL 211.59□□□□□ -0.551e-6■■■□□ 16.2
DDX52Q9Y2R4 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.248e-7■■■□□ 16.2
DDX52Q9Y2R4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC32.08■■■□□ 2.731e-6■■■□□ 16.2
DDX52Q9Y2R4 NAP1L4-203ENST00000430811 860 ntTSL 230.34■■■□□ 2.455e-7■■■□□ 16.2
DDX52Q9Y2R4 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC28.85■■■□□ 2.215e-7■■■□□ 16.2
DDX52Q9Y2R4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.161e-6■■■□□ 16.2
DDX52Q9Y2R4 SSBP4-205ENST00000598159 747 ntTSL 327.31■■□□□ 1.961e-6■■■□□ 16.2
DDX52Q9Y2R4 SSBP4-209ENST00000601357 606 ntTSL 526.96■■□□□ 1.911e-6■■■□□ 16.2
DDX52Q9Y2R4 DDX3X-214ENST00000622373 2129 nt24.1■■□□□ 1.455e-7■■■□□ 16.2
DDX52Q9Y2R4 SQSTM1-215ENST00000514093 842 ntTSL 524.03■■□□□ 1.445e-7■■■□□ 16.2
DDX52Q9Y2R4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC23.66■■□□□ 1.385e-7■■■□□ 16.2
DDX52Q9Y2R4 DDX3X-210ENST00000615313 568 ntTSL 422.91■■□□□ 1.265e-7■■■□□ 16.2
DDX52Q9Y2R4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC22.65■■□□□ 1.225e-7■■■□□ 16.2
DDX52Q9Y2R4 TBKBP1-203ENST00000578982 733 ntTSL 322.51■■□□□ 1.195e-7■■■□□ 16.2
DDX52Q9Y2R4 UBE2I-208ENST00000473256 1771 ntTSL 221.66■■□□□ 1.065e-7■■■□□ 16.2
DDX52Q9Y2R4 DDX3X-206ENST00000542215 1592 ntTSL 221.54■■□□□ 1.045e-7■■■□□ 16.2
DDX52Q9Y2R4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.035e-7■■■□□ 16.2
DDX52Q9Y2R4 SQSTM1-209ENST00000504627 602 ntTSL 521.27■■□□□ 15e-7■■■□□ 16.2
DDX52Q9Y2R4 SQSTM1-212ENST00000508284 578 ntTSL 421.27■■□□□ 15e-7■■■□□ 16.2
DDX52Q9Y2R4 SQSTM1-204ENST00000453046 572 ntTSL 421.27■■□□□ 15e-7■■■□□ 16.2
DDX52Q9Y2R4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.985e-7■■■□□ 16.2
DDX52Q9Y2R4 NAP1L4-213ENST00000526842 535 ntTSL 521.14■□□□□ 0.975e-7■■■□□ 16.2
DDX52Q9Y2R4 UBE2I-218ENST00000568288 501 ntTSL 520.8■□□□□ 0.925e-7■■■□□ 16.2
DDX52Q9Y2R4 TBCD-204ENST00000571316 1509 ntTSL 1 (best)20.6■□□□□ 0.895e-7■■■□□ 16.2
DDX52Q9Y2R4 UBE2I-217ENST00000568209 266 ntTSL 520.6■□□□□ 0.895e-7■■■□□ 16.2
DDX52Q9Y2R4 UBE2I-216ENST00000567383 538 ntTSL 420.54■□□□□ 0.885e-7■■■□□ 16.2
DDX52Q9Y2R4 DDX3X-208ENST00000611546 442 ntTSL 520.2■□□□□ 0.825e-7■■■□□ 16.2
DDX52Q9Y2R4 DDX3X-213ENST00000622198 409 ntTSL 420.2■□□□□ 0.825e-7■■■□□ 16.2
DDX52Q9Y2R4 SSBP4-204ENST00000597724 865 ntTSL 519.89■□□□□ 0.771e-6■■■□□ 16.2
DDX52Q9Y2R4 SSBP4-213ENST00000602088 622 ntTSL 519.89■□□□□ 0.771e-6■■■□□ 16.2
DDX52Q9Y2R4 UBE2I-210ENST00000562482 735 ntTSL 219.24■□□□□ 0.675e-7■■■□□ 16.2
DDX52Q9Y2R4 SSBP4-211ENST00000601614 628 ntTSL 218.98■□□□□ 0.631e-6■■■□□ 16.2
DDX52Q9Y2R4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.595e-7■■■□□ 16.2
DDX52Q9Y2R4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.56■□□□□ 0.565e-7■■■□□ 16.2
DDX52Q9Y2R4 OAZ1-208ENST00000592727 726 ntTSL 217.87■□□□□ 0.451e-23■■■□□ 16.2
DDX52Q9Y2R4 SSBP4-214ENST00000607020 504 ntTSL 317.74■□□□□ 0.431e-6■■■□□ 16.2
DDX52Q9Y2R4 DOT1L-204ENST00000457590 2907 ntTSL 517.57■□□□□ 0.45e-7■■■□□ 16.2
DDX52Q9Y2R4 SQSTM1-205ENST00000464493 532 ntTSL 417.23■□□□□ 0.355e-7■■■□□ 16.2
DDX52Q9Y2R4 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.315e-7■■■□□ 16.2
DDX52Q9Y2R4 TBKBP1-202ENST00000537587 705 ntTSL 316.32■□□□□ 0.25e-7■■■□□ 16.2
DDX52Q9Y2R4 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.095e-7■■■□□ 16.2
DDX52Q9Y2R4 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.045e-7■■■□□ 16.2
DDX52Q9Y2R4 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.015e-7■■■□□ 16.2
DDX52Q9Y2R4 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.055e-7■■■□□ 16.2
DDX52Q9Y2R4 SQSTM1-207ENST00000481335 562 ntTSL 414.41□□□□□ -0.15e-7■■■□□ 16.2
DDX52Q9Y2R4 SQSTM1-203ENST00000422245 628 ntTSL 413.72□□□□□ -0.215e-7■■■□□ 16.2
DDX52Q9Y2R4 NAP1L4-221ENST00000534372 544 ntTSL 512.78□□□□□ -0.365e-7■■■□□ 16.2
DDX52Q9Y2R4 DYRK1A-206ENST00000455097 338 ntTSL 1 (best)10.61□□□□□ -0.715e-7■■■□□ 16.2
DDX52Q9Y2R4 NAP1L4-219ENST00000531291 572 ntTSL 58.98□□□□□ -0.975e-7■■■□□ 16.2
DDX52Q9Y2R4 NAP1L4-216ENST00000528968 587 ntTSL 58.27□□□□□ -1.095e-7■■■□□ 16.2
DDX52Q9Y2R4 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC8.22□□□□□ -1.095e-7■■■□□ 16.2
DDX52Q9Y2R4 NAP1L4-220ENST00000532325 526 ntTSL 56.54□□□□□ -1.365e-7■■■□□ 16.2
Retrieved 100 of 4,483 protein–RNA pairs in 71.3 ms