Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CYSTM1Q9H1C7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CYSTM1Q9H1C7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CYSTM1Q9H1C7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CYSTM1Q9H1C7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC13.52□□□□□ -0.24
CYSTM1Q9H1C7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CYSTM1Q9H1C7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CYSTM1Q9H1C7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CYSTM1Q9H1C7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CYSTM1Q9H1C7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CYSTM1Q9H1C7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CYSTM1Q9H1C7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CYSTM1Q9H1C7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CYSTM1Q9H1C7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CYSTM1Q9H1C7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CYSTM1Q9H1C7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CYSTM1Q9H1C7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CYSTM1Q9H1C7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CYSTM1Q9H1C7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC13.51□□□□□ -0.25
CYSTM1Q9H1C7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC13.51□□□□□ -0.25
CYSTM1Q9H1C7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CYSTM1Q9H1C7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC13.51□□□□□ -0.25
CYSTM1Q9H1C7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
CYSTM1Q9H1C7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CYSTM1Q9H1C7 FBXW4P1-201ENST00000426721 2239 ntBASIC13.51□□□□□ -0.25
CYSTM1Q9H1C7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CYSTM1Q9H1C7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CYSTM1Q9H1C7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CYSTM1Q9H1C7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CYSTM1Q9H1C7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC13.5□□□□□ -0.25
CYSTM1Q9H1C7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CYSTM1Q9H1C7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
CYSTM1Q9H1C7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CYSTM1Q9H1C7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CYSTM1Q9H1C7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CYSTM1Q9H1C7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CYSTM1Q9H1C7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CYSTM1Q9H1C7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CYSTM1Q9H1C7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CYSTM1Q9H1C7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CYSTM1Q9H1C7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CYSTM1Q9H1C7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC13.5□□□□□ -0.25
CYSTM1Q9H1C7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC13.5□□□□□ -0.25
CYSTM1Q9H1C7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CYSTM1Q9H1C7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CYSTM1Q9H1C7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
CYSTM1Q9H1C7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CYSTM1Q9H1C7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC13.49□□□□□ -0.25
CYSTM1Q9H1C7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CYSTM1Q9H1C7 AP002414.2-202ENST00000590929 1450 ntBASIC13.49□□□□□ -0.25
CYSTM1Q9H1C7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CYSTM1Q9H1C7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
CYSTM1Q9H1C7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CYSTM1Q9H1C7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
CYSTM1Q9H1C7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CYSTM1Q9H1C7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CYSTM1Q9H1C7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CYSTM1Q9H1C7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CYSTM1Q9H1C7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC13.48□□□□□ -0.25
CYSTM1Q9H1C7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CYSTM1Q9H1C7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CYSTM1Q9H1C7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CYSTM1Q9H1C7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CYSTM1Q9H1C7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CYSTM1Q9H1C7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CYSTM1Q9H1C7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CYSTM1Q9H1C7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CYSTM1Q9H1C7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC13.47□□□□□ -0.25
CYSTM1Q9H1C7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CYSTM1Q9H1C7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CYSTM1Q9H1C7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CYSTM1Q9H1C7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CYSTM1Q9H1C7 PKD1P6-201ENST00000343738 4769 ntBASIC13.47□□□□□ -0.25
CYSTM1Q9H1C7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CYSTM1Q9H1C7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CYSTM1Q9H1C7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CYSTM1Q9H1C7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CYSTM1Q9H1C7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CYSTM1Q9H1C7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CYSTM1Q9H1C7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC13.46□□□□□ -0.25
CYSTM1Q9H1C7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CYSTM1Q9H1C7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CYSTM1Q9H1C7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CYSTM1Q9H1C7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CYSTM1Q9H1C7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
CYSTM1Q9H1C7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CYSTM1Q9H1C7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CYSTM1Q9H1C7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CYSTM1Q9H1C7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CYSTM1Q9H1C7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CYSTM1Q9H1C7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CYSTM1Q9H1C7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CYSTM1Q9H1C7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CYSTM1Q9H1C7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CYSTM1Q9H1C7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CYSTM1Q9H1C7 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
CYSTM1Q9H1C7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CYSTM1Q9H1C7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC13.45□□□□□ -0.26
CYSTM1Q9H1C7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC13.45□□□□□ -0.26
CYSTM1Q9H1C7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms