Protein–RNA interactions for Protein: Q99795

GPA33, Cell surface A33 antigen, humanhuman

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPA33Q99795 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
GPA33Q99795 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.83■□□□□ 0.93
GPA33Q99795 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GPA33Q99795 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
GPA33Q99795 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.93
GPA33Q99795 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.83■□□□□ 0.93
GPA33Q99795 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.83■□□□□ 0.93
GPA33Q99795 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.83■□□□□ 0.93
GPA33Q99795 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GPA33Q99795 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.83■□□□□ 0.93
GPA33Q99795 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
GPA33Q99795 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
GPA33Q99795 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GPA33Q99795 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GPA33Q99795 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GPA33Q99795 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GPA33Q99795 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
GPA33Q99795 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
GPA33Q99795 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GPA33Q99795 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GPA33Q99795 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GPA33Q99795 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GPA33Q99795 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
GPA33Q99795 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
GPA33Q99795 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.82■□□□□ 0.92
GPA33Q99795 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
GPA33Q99795 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.82■□□□□ 0.92
GPA33Q99795 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GPA33Q99795 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.81■□□□□ 0.92
GPA33Q99795 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.81■□□□□ 0.92
GPA33Q99795 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
GPA33Q99795 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GPA33Q99795 LONRF2P2-201ENST00000439212 571 ntBASIC20.81■□□□□ 0.92
GPA33Q99795 ABHD17AP5-201ENST00000580133 923 ntBASIC20.81■□□□□ 0.92
GPA33Q99795 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GPA33Q99795 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
GPA33Q99795 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GPA33Q99795 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
GPA33Q99795 DUSP8P3-201ENST00000399571 1760 ntBASIC20.8■□□□□ 0.92
GPA33Q99795 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GPA33Q99795 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
GPA33Q99795 U85056.1-201ENST00000616429 682 ntBASIC20.8■□□□□ 0.92
GPA33Q99795 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GPA33Q99795 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
GPA33Q99795 AC092068.2-201ENST00000590491 1708 ntBASIC20.8■□□□□ 0.92
GPA33Q99795 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GPA33Q99795 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GPA33Q99795 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
GPA33Q99795 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GPA33Q99795 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GPA33Q99795 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
GPA33Q99795 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GPA33Q99795 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.79■□□□□ 0.92
GPA33Q99795 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GPA33Q99795 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.79■□□□□ 0.92
GPA33Q99795 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
GPA33Q99795 AL161729.1-201ENST00000604104 1402 ntBASIC20.78■□□□□ 0.92
GPA33Q99795 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.78■□□□□ 0.92
GPA33Q99795 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
GPA33Q99795 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GPA33Q99795 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GPA33Q99795 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.78■□□□□ 0.92
GPA33Q99795 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GPA33Q99795 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
GPA33Q99795 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GPA33Q99795 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GPA33Q99795 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GPA33Q99795 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
GPA33Q99795 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GPA33Q99795 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GPA33Q99795 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.77■□□□□ 0.92
GPA33Q99795 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.77■□□□□ 0.92
GPA33Q99795 AC129492.7-201ENST00000622992 756 ntBASIC20.77■□□□□ 0.92
GPA33Q99795 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
GPA33Q99795 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.77■□□□□ 0.92
GPA33Q99795 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GPA33Q99795 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
GPA33Q99795 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GPA33Q99795 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
GPA33Q99795 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.76■□□□□ 0.91
GPA33Q99795 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GPA33Q99795 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
GPA33Q99795 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GPA33Q99795 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
GPA33Q99795 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GPA33Q99795 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPA33Q99795 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
GPA33Q99795 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPA33Q99795 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GPA33Q99795 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.75■□□□□ 0.91
GPA33Q99795 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPA33Q99795 C1orf229-201ENST00000623686 2258 ntBASIC20.75■□□□□ 0.91
GPA33Q99795 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPA33Q99795 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPA33Q99795 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GPA33Q99795 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPA33Q99795 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
GPA33Q99795 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
GPA33Q99795 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.74■□□□□ 0.91
GPA33Q99795 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms