Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ODF3Q96PU9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC16.9■□□□□ 0.3
ODF3Q96PU9 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ODF3Q96PU9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ODF3Q96PU9 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ODF3Q96PU9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC16.89■□□□□ 0.29
ODF3Q96PU9 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
ODF3Q96PU9 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ODF3Q96PU9 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
ODF3Q96PU9 ALDH1A3-203ENST00000557963 1670 ntBASIC16.89■□□□□ 0.29
ODF3Q96PU9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ODF3Q96PU9 THA1P-201ENST00000590384 1145 ntBASIC16.89■□□□□ 0.29
ODF3Q96PU9 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
ODF3Q96PU9 AC092068.2-201ENST00000590491 1708 ntBASIC16.89■□□□□ 0.29
ODF3Q96PU9 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
ODF3Q96PU9 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ODF3Q96PU9 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
ODF3Q96PU9 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC16.88■□□□□ 0.29
ODF3Q96PU9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC16.88■□□□□ 0.29
ODF3Q96PU9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ODF3Q96PU9 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.88■□□□□ 0.29
ODF3Q96PU9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC16.88■□□□□ 0.29
ODF3Q96PU9 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC16.88■□□□□ 0.29
ODF3Q96PU9 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ODF3Q96PU9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC16.87■□□□□ 0.29
ODF3Q96PU9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ODF3Q96PU9 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ODF3Q96PU9 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ODF3Q96PU9 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ODF3Q96PU9 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC16.87■□□□□ 0.29
ODF3Q96PU9 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ODF3Q96PU9 MIR4281-201ENST00000580852 62 ntBASIC16.87■□□□□ 0.29
ODF3Q96PU9 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC16.87■□□□□ 0.29
ODF3Q96PU9 NFE2L3P1-201ENST00000588207 1959 ntBASIC16.87■□□□□ 0.29
ODF3Q96PU9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
ODF3Q96PU9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
ODF3Q96PU9 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC16.86■□□□□ 0.29
ODF3Q96PU9 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
ODF3Q96PU9 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
ODF3Q96PU9 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
ODF3Q96PU9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ODF3Q96PU9 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC16.86■□□□□ 0.29
ODF3Q96PU9 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.86■□□□□ 0.29
ODF3Q96PU9 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC16.86■□□□□ 0.29
ODF3Q96PU9 ANOS2P-203ENST00000472227 1816 ntBASIC16.86■□□□□ 0.29
ODF3Q96PU9 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ODF3Q96PU9 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC16.86■□□□□ 0.29
ODF3Q96PU9 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ODF3Q96PU9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ODF3Q96PU9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC16.85■□□□□ 0.29
ODF3Q96PU9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC16.85■□□□□ 0.29
ODF3Q96PU9 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ODF3Q96PU9 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ODF3Q96PU9 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ODF3Q96PU9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC16.85■□□□□ 0.29
ODF3Q96PU9 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ODF3Q96PU9 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC16.85■□□□□ 0.29
ODF3Q96PU9 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC16.85■□□□□ 0.29
ODF3Q96PU9 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ODF3Q96PU9 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ODF3Q96PU9 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
ODF3Q96PU9 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.85■□□□□ 0.29
ODF3Q96PU9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ODF3Q96PU9 AC068473.5-201ENST00000616428 2072 ntBASIC16.84■□□□□ 0.29
ODF3Q96PU9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC16.84■□□□□ 0.29
ODF3Q96PU9 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ODF3Q96PU9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16.84■□□□□ 0.29
ODF3Q96PU9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ODF3Q96PU9 MIR4508-201ENST00000584178 70 ntBASIC16.84■□□□□ 0.29
ODF3Q96PU9 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
ODF3Q96PU9 AC012354.3-201ENST00000623734 483 ntBASIC16.84■□□□□ 0.29
ODF3Q96PU9 AF131216.4-201ENST00000638924 1588 ntBASIC16.84■□□□□ 0.29
ODF3Q96PU9 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ODF3Q96PU9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ODF3Q96PU9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ODF3Q96PU9 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ODF3Q96PU9 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
ODF3Q96PU9 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ODF3Q96PU9 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ODF3Q96PU9 BEX3-202ENST00000372634 753 ntTSL 2 BASIC16.83■□□□□ 0.28
ODF3Q96PU9 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC16.83■□□□□ 0.28
ODF3Q96PU9 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ODF3Q96PU9 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC16.83■□□□□ 0.28
ODF3Q96PU9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ODF3Q96PU9 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC16.83■□□□□ 0.28
ODF3Q96PU9 PVT1_1.1-201ENST00000615125 194 ntBASIC16.83■□□□□ 0.28
ODF3Q96PU9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC16.83■□□□□ 0.28
ODF3Q96PU9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC16.83■□□□□ 0.28
ODF3Q96PU9 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ODF3Q96PU9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
ODF3Q96PU9 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ODF3Q96PU9 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ODF3Q96PU9 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ODF3Q96PU9 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC16.82■□□□□ 0.28
ODF3Q96PU9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ODF3Q96PU9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ODF3Q96PU9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ODF3Q96PU9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ODF3Q96PU9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ODF3Q96PU9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms