Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
DUX3Q96PT4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.75■□□□□ 0.43
DUX3Q96PT4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DUX3Q96PT4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC17.74■□□□□ 0.43
DUX3Q96PT4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
DUX3Q96PT4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.74■□□□□ 0.43
DUX3Q96PT4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DUX3Q96PT4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DUX3Q96PT4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DUX3Q96PT4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
DUX3Q96PT4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DUX3Q96PT4 AL512631.2-201ENST00000604634 923 ntBASIC17.74■□□□□ 0.43
DUX3Q96PT4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.74■□□□□ 0.43
DUX3Q96PT4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DUX3Q96PT4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
DUX3Q96PT4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DUX3Q96PT4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
DUX3Q96PT4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
DUX3Q96PT4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DUX3Q96PT4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.73■□□□□ 0.43
DUX3Q96PT4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.73■□□□□ 0.43
DUX3Q96PT4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
DUX3Q96PT4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DUX3Q96PT4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.73■□□□□ 0.43
DUX3Q96PT4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.73■□□□□ 0.43
DUX3Q96PT4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DUX3Q96PT4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.73■□□□□ 0.43
DUX3Q96PT4 AC022211.4-201ENST00000625094 2161 ntBASIC17.73■□□□□ 0.43
DUX3Q96PT4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
DUX3Q96PT4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DUX3Q96PT4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DUX3Q96PT4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DUX3Q96PT4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DUX3Q96PT4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DUX3Q96PT4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.72■□□□□ 0.43
DUX3Q96PT4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DUX3Q96PT4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DUX3Q96PT4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DUX3Q96PT4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DUX3Q96PT4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DUX3Q96PT4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DUX3Q96PT4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
DUX3Q96PT4 AC096631.2-201ENST00000436136 790 ntBASIC17.71■□□□□ 0.43
DUX3Q96PT4 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.71■□□□□ 0.43
DUX3Q96PT4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DUX3Q96PT4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC17.71■□□□□ 0.42
DUX3Q96PT4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
DUX3Q96PT4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DUX3Q96PT4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DUX3Q96PT4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DUX3Q96PT4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.7■□□□□ 0.42
DUX3Q96PT4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.7■□□□□ 0.42
DUX3Q96PT4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DUX3Q96PT4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DUX3Q96PT4 HLA-L-211ENST00000482052 1765 ntBASIC17.7■□□□□ 0.42
DUX3Q96PT4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DUX3Q96PT4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
DUX3Q96PT4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.69■□□□□ 0.42
DUX3Q96PT4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
DUX3Q96PT4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
DUX3Q96PT4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DUX3Q96PT4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
DUX3Q96PT4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DUX3Q96PT4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DUX3Q96PT4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC17.69■□□□□ 0.42
DUX3Q96PT4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DUX3Q96PT4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
DUX3Q96PT4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC17.69■□□□□ 0.42
DUX3Q96PT4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
DUX3Q96PT4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DUX3Q96PT4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DUX3Q96PT4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC17.68■□□□□ 0.42
DUX3Q96PT4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DUX3Q96PT4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DUX3Q96PT4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
DUX3Q96PT4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
DUX3Q96PT4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DUX3Q96PT4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.68■□□□□ 0.42
DUX3Q96PT4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.68■□□□□ 0.42
DUX3Q96PT4 AL139246.5-201ENST00000606645 996 ntBASIC17.68■□□□□ 0.42
DUX3Q96PT4 AC110285.6-201ENST00000617652 491 ntBASIC17.68■□□□□ 0.42
DUX3Q96PT4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DUX3Q96PT4 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.67■□□□□ 0.42
DUX3Q96PT4 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.67■□□□□ 0.42
DUX3Q96PT4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
DUX3Q96PT4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DUX3Q96PT4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
DUX3Q96PT4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DUX3Q96PT4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DUX3Q96PT4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DUX3Q96PT4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DUX3Q96PT4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DUX3Q96PT4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DUX3Q96PT4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
DUX3Q96PT4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.67■□□□□ 0.42
DUX3Q96PT4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.67■□□□□ 0.42
DUX3Q96PT4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DUX3Q96PT4 AL022069.1-201ENST00000568025 1636 ntBASIC17.67■□□□□ 0.42
DUX3Q96PT4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.67■□□□□ 0.42
DUX3Q96PT4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms