Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
LRCH3Q96II8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
LRCH3Q96II8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC25.01■■□□□ 1.59
LRCH3Q96II8 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
LRCH3Q96II8 PPP1R14BP3-201ENST00000509033 445 ntBASIC25.01■■□□□ 1.59
LRCH3Q96II8 AC073111.5-205ENST00000641717 521 ntBASIC25.01■■□□□ 1.59
LRCH3Q96II8 TSPY26P-201ENST00000476365 1326 ntBASIC25.01■■□□□ 1.59
LRCH3Q96II8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
LRCH3Q96II8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
LRCH3Q96II8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
LRCH3Q96II8 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
LRCH3Q96II8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC25.01■■□□□ 1.59
LRCH3Q96II8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
LRCH3Q96II8 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC25■■□□□ 1.59
LRCH3Q96II8 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
LRCH3Q96II8 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC25■■□□□ 1.59
LRCH3Q96II8 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC25■■□□□ 1.59
LRCH3Q96II8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25■■□□□ 1.59
LRCH3Q96II8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25■■□□□ 1.59
LRCH3Q96II8 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25■■□□□ 1.59
LRCH3Q96II8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25■■□□□ 1.59
LRCH3Q96II8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
LRCH3Q96II8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
LRCH3Q96II8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
LRCH3Q96II8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.99■■□□□ 1.59
LRCH3Q96II8 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
LRCH3Q96II8 KRT18P14-201ENST00000534205 1250 ntBASIC24.99■■□□□ 1.59
LRCH3Q96II8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC24.99■■□□□ 1.59
LRCH3Q96II8 ARL16-209ENST00000573715 763 ntTSL 3 BASIC24.99■■□□□ 1.59
LRCH3Q96II8 ARL16-211ENST00000576135 694 ntTSL 3 BASIC24.99■■□□□ 1.59
LRCH3Q96II8 AC126544.1-201ENST00000580842 1059 ntBASIC24.99■■□□□ 1.59
LRCH3Q96II8 AL358852.1-201ENST00000623174 1268 ntBASIC24.99■■□□□ 1.59
LRCH3Q96II8 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
LRCH3Q96II8 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
LRCH3Q96II8 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
LRCH3Q96II8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
LRCH3Q96II8 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
LRCH3Q96II8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
LRCH3Q96II8 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
LRCH3Q96II8 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC24.98■■□□□ 1.59
LRCH3Q96II8 AL109923.1-201ENST00000618799 583 ntBASIC24.98■■□□□ 1.59
LRCH3Q96II8 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
LRCH3Q96II8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
LRCH3Q96II8 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC24.97■■□□□ 1.59
LRCH3Q96II8 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC24.97■■□□□ 1.59
LRCH3Q96II8 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC24.97■■□□□ 1.59
LRCH3Q96II8 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.97■■□□□ 1.59
LRCH3Q96II8 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
LRCH3Q96II8 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.97■■□□□ 1.59
LRCH3Q96II8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
LRCH3Q96II8 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
LRCH3Q96II8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
LRCH3Q96II8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
LRCH3Q96II8 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
LRCH3Q96II8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
LRCH3Q96II8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC24.96■■□□□ 1.59
LRCH3Q96II8 AC093827.2-201ENST00000512654 315 ntBASIC24.96■■□□□ 1.59
LRCH3Q96II8 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC24.96■■□□□ 1.59
LRCH3Q96II8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
LRCH3Q96II8 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.59
LRCH3Q96II8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
LRCH3Q96II8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
LRCH3Q96II8 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
LRCH3Q96II8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
LRCH3Q96II8 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
LRCH3Q96II8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
LRCH3Q96II8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC24.95■■□□□ 1.58
LRCH3Q96II8 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
LRCH3Q96II8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
LRCH3Q96II8 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
LRCH3Q96II8 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC24.94■■□□□ 1.58
LRCH3Q96II8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.94■■□□□ 1.58
LRCH3Q96II8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
LRCH3Q96II8 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC24.94■■□□□ 1.58
LRCH3Q96II8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC24.94■■□□□ 1.58
LRCH3Q96II8 AC026185.1-201ENST00000445748 174 ntBASIC24.94■■□□□ 1.58
LRCH3Q96II8 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC24.94■■□□□ 1.58
LRCH3Q96II8 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
LRCH3Q96II8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
LRCH3Q96II8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
LRCH3Q96II8 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
LRCH3Q96II8 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.93■■□□□ 1.58
LRCH3Q96II8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
LRCH3Q96II8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
LRCH3Q96II8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
LRCH3Q96II8 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
LRCH3Q96II8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC24.93■■□□□ 1.58
LRCH3Q96II8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
LRCH3Q96II8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
LRCH3Q96II8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC24.93■■□□□ 1.58
LRCH3Q96II8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
LRCH3Q96II8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
LRCH3Q96II8 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
LRCH3Q96II8 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
LRCH3Q96II8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.92■■□□□ 1.58
LRCH3Q96II8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.92■■□□□ 1.58
LRCH3Q96II8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC24.92■■□□□ 1.58
LRCH3Q96II8 DET1-205ENST00000558413 583 ntTSL 4 BASIC24.92■■□□□ 1.58
LRCH3Q96II8 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC24.92■■□□□ 1.58
LRCH3Q96II8 AL499627.2-201ENST00000606283 725 ntBASIC24.92■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms