Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AC141586.4-201ENST00000624558 1573 ntBASIC27.12■■□□□ 1.93
DDX11Q96FC9 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
DDX11Q96FC9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC27.11■■□□□ 1.93
DDX11Q96FC9 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
DDX11Q96FC9 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC27.11■■□□□ 1.93
DDX11Q96FC9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
DDX11Q96FC9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
DDX11Q96FC9 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
DDX11Q96FC9 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
DDX11Q96FC9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC27.1■■□□□ 1.93
DDX11Q96FC9 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
DDX11Q96FC9 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
DDX11Q96FC9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC27.09■■□□□ 1.93
DDX11Q96FC9 ABCB10P4-201ENST00000566803 2184 ntBASIC27.09■■□□□ 1.93
DDX11Q96FC9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC27.09■■□□□ 1.93
DDX11Q96FC9 AC090877.2-201ENST00000558441 1738 ntBASIC27.09■■□□□ 1.93
DDX11Q96FC9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
DDX11Q96FC9 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
DDX11Q96FC9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
DDX11Q96FC9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
DDX11Q96FC9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
DDX11Q96FC9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
DDX11Q96FC9 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
DDX11Q96FC9 AC010997.5-201ENST00000609182 354 ntBASIC27.07■■□□□ 1.92
DDX11Q96FC9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
DDX11Q96FC9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
DDX11Q96FC9 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
DDX11Q96FC9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC27.07■■□□□ 1.92
DDX11Q96FC9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC27.07■■□□□ 1.92
DDX11Q96FC9 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
DDX11Q96FC9 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
DDX11Q96FC9 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
DDX11Q96FC9 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
DDX11Q96FC9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC27.06■■□□□ 1.92
DDX11Q96FC9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC27.06■■□□□ 1.92
DDX11Q96FC9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
DDX11Q96FC9 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
DDX11Q96FC9 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC27.05■■□□□ 1.92
DDX11Q96FC9 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
DDX11Q96FC9 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
DDX11Q96FC9 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
DDX11Q96FC9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC27.05■■□□□ 1.92
DDX11Q96FC9 SSSCA1-AS1-201ENST00000567594 614 ntBASIC27.05■■□□□ 1.92
DDX11Q96FC9 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC27.05■■□□□ 1.92
DDX11Q96FC9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
DDX11Q96FC9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
DDX11Q96FC9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC27.04■■□□□ 1.92
DDX11Q96FC9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC27.04■■□□□ 1.92
DDX11Q96FC9 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
DDX11Q96FC9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
DDX11Q96FC9 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
DDX11Q96FC9 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
DDX11Q96FC9 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC27.03■■□□□ 1.92
DDX11Q96FC9 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
DDX11Q96FC9 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
DDX11Q96FC9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC27.03■■□□□ 1.92
DDX11Q96FC9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC27.03■■□□□ 1.92
DDX11Q96FC9 SRR-208ENST00000576848 588 ntTSL 4 BASIC27.03■■□□□ 1.92
DDX11Q96FC9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC27.03■■□□□ 1.92
DDX11Q96FC9 SHD-204ENST00000599689 1729 ntTSL 5 BASIC27.03■■□□□ 1.92
DDX11Q96FC9 MTDHP2-201ENST00000601468 714 ntBASIC27.03■■□□□ 1.92
DDX11Q96FC9 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
DDX11Q96FC9 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC27.02■■□□□ 1.92
DDX11Q96FC9 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
DDX11Q96FC9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC27.02■■□□□ 1.92
DDX11Q96FC9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC27.02■■□□□ 1.92
DDX11Q96FC9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC27.02■■□□□ 1.92
DDX11Q96FC9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC27.02■■□□□ 1.92
DDX11Q96FC9 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC27.02■■□□□ 1.92
DDX11Q96FC9 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
DDX11Q96FC9 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
DDX11Q96FC9 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC27.02■■□□□ 1.92
DDX11Q96FC9 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
DDX11Q96FC9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC27.02■■□□□ 1.92
DDX11Q96FC9 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
DDX11Q96FC9 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
DDX11Q96FC9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
DDX11Q96FC9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
DDX11Q96FC9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC27.01■■□□□ 1.91
DDX11Q96FC9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC27.01■■□□□ 1.91
DDX11Q96FC9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC27.01■■□□□ 1.91
DDX11Q96FC9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC27.01■■□□□ 1.91
DDX11Q96FC9 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC27.01■■□□□ 1.91
DDX11Q96FC9 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC27.01■■□□□ 1.91
DDX11Q96FC9 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
DDX11Q96FC9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC27■■□□□ 1.91
DDX11Q96FC9 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
DDX11Q96FC9 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
DDX11Q96FC9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.99■■□□□ 1.91
DDX11Q96FC9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.99■■□□□ 1.91
DDX11Q96FC9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.99■■□□□ 1.91
DDX11Q96FC9 MIR6724-1-201ENST00000616420 92 ntBASIC26.99■■□□□ 1.91
DDX11Q96FC9 MIR6724-2-201ENST00000616483 92 ntBASIC26.99■■□□□ 1.91
DDX11Q96FC9 MIR6724-4-201ENST00000617390 92 ntBASIC26.99■■□□□ 1.91
DDX11Q96FC9 MIR6724-3-201ENST00000622482 92 ntBASIC26.99■■□□□ 1.91
DDX11Q96FC9 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
DDX11Q96FC9 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
DDX11Q96FC9 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.98■■□□□ 1.91
DDX11Q96FC9 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
DDX11Q96FC9 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.98■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms