Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.03■□□□□ 0.8
RAB40AQ8WXH6 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB40AQ8WXH6 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
RAB40AQ8WXH6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB40AQ8WXH6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB40AQ8WXH6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
RAB40AQ8WXH6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB40AQ8WXH6 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.02■□□□□ 0.8
RAB40AQ8WXH6 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.02■□□□□ 0.8
RAB40AQ8WXH6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.02■□□□□ 0.8
RAB40AQ8WXH6 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB40AQ8WXH6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.02■□□□□ 0.8
RAB40AQ8WXH6 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB40AQ8WXH6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RAB40AQ8WXH6 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RAB40AQ8WXH6 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RAB40AQ8WXH6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.02■□□□□ 0.79
RAB40AQ8WXH6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
RAB40AQ8WXH6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAB40AQ8WXH6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB40AQ8WXH6 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.01■□□□□ 0.79
RAB40AQ8WXH6 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB40AQ8WXH6 AC139795.1-202ENST00000500444 432 ntBASIC20.01■□□□□ 0.79
RAB40AQ8WXH6 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.01■□□□□ 0.79
RAB40AQ8WXH6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.01■□□□□ 0.79
RAB40AQ8WXH6 AC074183.2-201ENST00000623112 922 ntBASIC20.01■□□□□ 0.79
RAB40AQ8WXH6 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB40AQ8WXH6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RAB40AQ8WXH6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB40AQ8WXH6 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB40AQ8WXH6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RAB40AQ8WXH6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
RAB40AQ8WXH6 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20■□□□□ 0.79
RAB40AQ8WXH6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20■□□□□ 0.79
RAB40AQ8WXH6 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB40AQ8WXH6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RAB40AQ8WXH6 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20■□□□□ 0.79
RAB40AQ8WXH6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAB40AQ8WXH6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAB40AQ8WXH6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RAB40AQ8WXH6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB40AQ8WXH6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAB40AQ8WXH6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB40AQ8WXH6 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.99■□□□□ 0.79
RAB40AQ8WXH6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAB40AQ8WXH6 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB40AQ8WXH6 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RAB40AQ8WXH6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAB40AQ8WXH6 AC233723.2-201ENST00000623798 2106 ntBASIC19.99■□□□□ 0.79
RAB40AQ8WXH6 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB40AQ8WXH6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.98■□□□□ 0.79
RAB40AQ8WXH6 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
RAB40AQ8WXH6 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB40AQ8WXH6 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.98■□□□□ 0.79
RAB40AQ8WXH6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB40AQ8WXH6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.98■□□□□ 0.79
RAB40AQ8WXH6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB40AQ8WXH6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB40AQ8WXH6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RAB40AQ8WXH6 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.97■□□□□ 0.79
RAB40AQ8WXH6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAB40AQ8WXH6 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB40AQ8WXH6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB40AQ8WXH6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB40AQ8WXH6 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.97■□□□□ 0.79
RAB40AQ8WXH6 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAB40AQ8WXH6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.97■□□□□ 0.79
RAB40AQ8WXH6 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.96■□□□□ 0.79
RAB40AQ8WXH6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB40AQ8WXH6 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.96■□□□□ 0.79
RAB40AQ8WXH6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RAB40AQ8WXH6 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RAB40AQ8WXH6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB40AQ8WXH6 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.96■□□□□ 0.79
RAB40AQ8WXH6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB40AQ8WXH6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB40AQ8WXH6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB40AQ8WXH6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAB40AQ8WXH6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RAB40AQ8WXH6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB40AQ8WXH6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAB40AQ8WXH6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAB40AQ8WXH6 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB40AQ8WXH6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RAB40AQ8WXH6 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAB40AQ8WXH6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.94■□□□□ 0.78
RAB40AQ8WXH6 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.94■□□□□ 0.78
RAB40AQ8WXH6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAB40AQ8WXH6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB40AQ8WXH6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB40AQ8WXH6 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB40AQ8WXH6 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RAB40AQ8WXH6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAB40AQ8WXH6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
RAB40AQ8WXH6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB40AQ8WXH6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB40AQ8WXH6 KRT18P10-201ENST00000388836 1287 ntBASIC19.93■□□□□ 0.78
RAB40AQ8WXH6 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.93■□□□□ 0.78
RAB40AQ8WXH6 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB40AQ8WXH6 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms