Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
CPNE9Q8IYJ1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
CPNE9Q8IYJ1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
CPNE9Q8IYJ1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.62■■□□□ 1.21
CPNE9Q8IYJ1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.62■■□□□ 1.21
CPNE9Q8IYJ1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.62■■□□□ 1.21
CPNE9Q8IYJ1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.62■■□□□ 1.21
CPNE9Q8IYJ1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
CPNE9Q8IYJ1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CPNE9Q8IYJ1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
CPNE9Q8IYJ1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CPNE9Q8IYJ1 AF131216.4-201ENST00000638924 1588 ntBASIC22.62■■□□□ 1.21
CPNE9Q8IYJ1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
CPNE9Q8IYJ1 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CPNE9Q8IYJ1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
CPNE9Q8IYJ1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
CPNE9Q8IYJ1 AL161729.1-201ENST00000604104 1402 ntBASIC22.61■■□□□ 1.21
CPNE9Q8IYJ1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
CPNE9Q8IYJ1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CPNE9Q8IYJ1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CPNE9Q8IYJ1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CPNE9Q8IYJ1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
CPNE9Q8IYJ1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
CPNE9Q8IYJ1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CPNE9Q8IYJ1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CPNE9Q8IYJ1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CPNE9Q8IYJ1 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CPNE9Q8IYJ1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CPNE9Q8IYJ1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CPNE9Q8IYJ1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.59■■□□□ 1.21
CPNE9Q8IYJ1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
CPNE9Q8IYJ1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.59■■□□□ 1.21
CPNE9Q8IYJ1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CPNE9Q8IYJ1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
CPNE9Q8IYJ1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.59■■□□□ 1.21
CPNE9Q8IYJ1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CPNE9Q8IYJ1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CPNE9Q8IYJ1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.59■■□□□ 1.21
CPNE9Q8IYJ1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CPNE9Q8IYJ1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CPNE9Q8IYJ1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CPNE9Q8IYJ1 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.58■■□□□ 1.21
CPNE9Q8IYJ1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.58■■□□□ 1.21
CPNE9Q8IYJ1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.58■■□□□ 1.21
CPNE9Q8IYJ1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.58■■□□□ 1.21
CPNE9Q8IYJ1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CPNE9Q8IYJ1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CPNE9Q8IYJ1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CPNE9Q8IYJ1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CPNE9Q8IYJ1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
CPNE9Q8IYJ1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CPNE9Q8IYJ1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CPNE9Q8IYJ1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPNE9Q8IYJ1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPNE9Q8IYJ1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPNE9Q8IYJ1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.57■■□□□ 1.2
CPNE9Q8IYJ1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CPNE9Q8IYJ1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CPNE9Q8IYJ1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.56■■□□□ 1.2
CPNE9Q8IYJ1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.56■■□□□ 1.2
CPNE9Q8IYJ1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CPNE9Q8IYJ1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CPNE9Q8IYJ1 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CPNE9Q8IYJ1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CPNE9Q8IYJ1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.56■■□□□ 1.2
CPNE9Q8IYJ1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPNE9Q8IYJ1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.55■■□□□ 1.2
CPNE9Q8IYJ1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.55■■□□□ 1.2
CPNE9Q8IYJ1 AL031848.2-201ENST00000607670 837 ntBASIC22.55■■□□□ 1.2
CPNE9Q8IYJ1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.55■■□□□ 1.2
CPNE9Q8IYJ1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CPNE9Q8IYJ1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CPNE9Q8IYJ1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPNE9Q8IYJ1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CPNE9Q8IYJ1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.54■■□□□ 1.2
CPNE9Q8IYJ1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.54■■□□□ 1.2
CPNE9Q8IYJ1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CPNE9Q8IYJ1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CPNE9Q8IYJ1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CPNE9Q8IYJ1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.54■■□□□ 1.2
CPNE9Q8IYJ1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CPNE9Q8IYJ1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
CPNE9Q8IYJ1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CPNE9Q8IYJ1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CPNE9Q8IYJ1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.54■■□□□ 1.2
CPNE9Q8IYJ1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CPNE9Q8IYJ1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CPNE9Q8IYJ1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
CPNE9Q8IYJ1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CPNE9Q8IYJ1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CPNE9Q8IYJ1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.53■■□□□ 1.2
CPNE9Q8IYJ1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CPNE9Q8IYJ1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.52■■□□□ 1.2
CPNE9Q8IYJ1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CPNE9Q8IYJ1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.52■■□□□ 1.2
CPNE9Q8IYJ1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CPNE9Q8IYJ1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CPNE9Q8IYJ1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CPNE9Q8IYJ1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CPNE9Q8IYJ1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms