Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NFE4Q86UQ8 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC16.24■□□□□ 0.19
NFE4Q86UQ8 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NFE4Q86UQ8 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC16.24■□□□□ 0.19
NFE4Q86UQ8 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC16.24■□□□□ 0.19
NFE4Q86UQ8 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NFE4Q86UQ8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NFE4Q86UQ8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NFE4Q86UQ8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NFE4Q86UQ8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC16.24■□□□□ 0.19
NFE4Q86UQ8 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NFE4Q86UQ8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NFE4Q86UQ8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
NFE4Q86UQ8 C9orf163-202ENST00000624034 2573 ntBASIC16.24■□□□□ 0.19
NFE4Q86UQ8 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
NFE4Q86UQ8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NFE4Q86UQ8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NFE4Q86UQ8 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NFE4Q86UQ8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC16.23■□□□□ 0.19
NFE4Q86UQ8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NFE4Q86UQ8 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NFE4Q86UQ8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC16.23■□□□□ 0.19
NFE4Q86UQ8 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NFE4Q86UQ8 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC16.23■□□□□ 0.19
NFE4Q86UQ8 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC16.23■□□□□ 0.19
NFE4Q86UQ8 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.23■□□□□ 0.19
NFE4Q86UQ8 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NFE4Q86UQ8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC16.23■□□□□ 0.19
NFE4Q86UQ8 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NFE4Q86UQ8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.23■□□□□ 0.19
NFE4Q86UQ8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NFE4Q86UQ8 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NFE4Q86UQ8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC16.22■□□□□ 0.19
NFE4Q86UQ8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NFE4Q86UQ8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NFE4Q86UQ8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.22■□□□□ 0.19
NFE4Q86UQ8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.22■□□□□ 0.19
NFE4Q86UQ8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
NFE4Q86UQ8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
NFE4Q86UQ8 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NFE4Q86UQ8 YBX1P4-201ENST00000392794 808 ntBASIC16.22■□□□□ 0.19
NFE4Q86UQ8 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NFE4Q86UQ8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NFE4Q86UQ8 MTX2-204ENST00000443241 799 ntTSL 3 BASIC16.22■□□□□ 0.19
NFE4Q86UQ8 SPCS2P3-201ENST00000500401 656 ntBASIC16.22■□□□□ 0.19
NFE4Q86UQ8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.22■□□□□ 0.19
NFE4Q86UQ8 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NFE4Q86UQ8 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NFE4Q86UQ8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.22■□□□□ 0.19
NFE4Q86UQ8 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NFE4Q86UQ8 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC16.22■□□□□ 0.19
NFE4Q86UQ8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC16.21■□□□□ 0.19
NFE4Q86UQ8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NFE4Q86UQ8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NFE4Q86UQ8 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NFE4Q86UQ8 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC16.21■□□□□ 0.19
NFE4Q86UQ8 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NFE4Q86UQ8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NFE4Q86UQ8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NFE4Q86UQ8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NFE4Q86UQ8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC16.21■□□□□ 0.19
NFE4Q86UQ8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.21■□□□□ 0.19
NFE4Q86UQ8 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NFE4Q86UQ8 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
NFE4Q86UQ8 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
NFE4Q86UQ8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NFE4Q86UQ8 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
NFE4Q86UQ8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NFE4Q86UQ8 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NFE4Q86UQ8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
NFE4Q86UQ8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NFE4Q86UQ8 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NFE4Q86UQ8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NFE4Q86UQ8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NFE4Q86UQ8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NFE4Q86UQ8 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NFE4Q86UQ8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NFE4Q86UQ8 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NFE4Q86UQ8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.19■□□□□ 0.18
NFE4Q86UQ8 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC16.19■□□□□ 0.18
NFE4Q86UQ8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NFE4Q86UQ8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NFE4Q86UQ8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NFE4Q86UQ8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
NFE4Q86UQ8 RARRES2P1-201ENST00000474487 481 ntBASIC16.19■□□□□ 0.18
NFE4Q86UQ8 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NFE4Q86UQ8 MIR6089-201ENST00000616698 64 ntBASIC16.19■□□□□ 0.18
NFE4Q86UQ8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NFE4Q86UQ8 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC16.19■□□□□ 0.18
NFE4Q86UQ8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NFE4Q86UQ8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC16.19■□□□□ 0.18
NFE4Q86UQ8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NFE4Q86UQ8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NFE4Q86UQ8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NFE4Q86UQ8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.18■□□□□ 0.18
NFE4Q86UQ8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NFE4Q86UQ8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NFE4Q86UQ8 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NFE4Q86UQ8 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NFE4Q86UQ8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms