Protein–RNA interactions for Protein: Q7RTT4

SSX8, Protein SSX8, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX8Q7RTT4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSX8Q7RTT4 AC241377.3-202ENST00000626088 1088 ntBASIC19.84■□□□□ 0.77
SSX8Q7RTT4 AC241585.3-202ENST00000628937 1088 ntBASIC19.84■□□□□ 0.77
SSX8Q7RTT4 AC245100.8-202ENST00000629247 1058 ntBASIC19.84■□□□□ 0.77
SSX8Q7RTT4 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.84■□□□□ 0.77
SSX8Q7RTT4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SSX8Q7RTT4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SSX8Q7RTT4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SSX8Q7RTT4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSX8Q7RTT4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SSX8Q7RTT4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SSX8Q7RTT4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
SSX8Q7RTT4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SSX8Q7RTT4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SSX8Q7RTT4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSX8Q7RTT4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SSX8Q7RTT4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.82■□□□□ 0.76
SSX8Q7RTT4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSX8Q7RTT4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SSX8Q7RTT4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SSX8Q7RTT4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SSX8Q7RTT4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSX8Q7RTT4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.82■□□□□ 0.76
SSX8Q7RTT4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SSX8Q7RTT4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.82■□□□□ 0.76
SSX8Q7RTT4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSX8Q7RTT4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.82■□□□□ 0.76
SSX8Q7RTT4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.81■□□□□ 0.76
SSX8Q7RTT4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSX8Q7RTT4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSX8Q7RTT4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.81■□□□□ 0.76
SSX8Q7RTT4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SSX8Q7RTT4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.81■□□□□ 0.76
SSX8Q7RTT4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SSX8Q7RTT4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.81■□□□□ 0.76
SSX8Q7RTT4 ALDH1A3-203ENST00000557963 1670 ntBASIC19.81■□□□□ 0.76
SSX8Q7RTT4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.8■□□□□ 0.76
SSX8Q7RTT4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSX8Q7RTT4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSX8Q7RTT4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSX8Q7RTT4 MIR638-201ENST00000385237 100 ntBASIC19.8■□□□□ 0.76
SSX8Q7RTT4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SSX8Q7RTT4 AC096631.2-201ENST00000436136 790 ntBASIC19.8■□□□□ 0.76
SSX8Q7RTT4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.8■□□□□ 0.76
SSX8Q7RTT4 AL138724.1-201ENST00000606771 1088 ntBASIC19.8■□□□□ 0.76
SSX8Q7RTT4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.8■□□□□ 0.76
SSX8Q7RTT4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSX8Q7RTT4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SSX8Q7RTT4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SSX8Q7RTT4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.8■□□□□ 0.76
SSX8Q7RTT4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SSX8Q7RTT4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SSX8Q7RTT4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SSX8Q7RTT4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSX8Q7RTT4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSX8Q7RTT4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSX8Q7RTT4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.79■□□□□ 0.76
SSX8Q7RTT4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.79■□□□□ 0.76
SSX8Q7RTT4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.79■□□□□ 0.76
SSX8Q7RTT4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSX8Q7RTT4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SSX8Q7RTT4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SSX8Q7RTT4 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.79■□□□□ 0.76
SSX8Q7RTT4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SSX8Q7RTT4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSX8Q7RTT4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.79■□□□□ 0.76
SSX8Q7RTT4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SSX8Q7RTT4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSX8Q7RTT4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SSX8Q7RTT4 AC106739.1-201ENST00000617035 715 ntBASIC19.78■□□□□ 0.76
SSX8Q7RTT4 AC135731.1-201ENST00000569415 2548 ntBASIC19.78■□□□□ 0.76
SSX8Q7RTT4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.78■□□□□ 0.76
SSX8Q7RTT4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SSX8Q7RTT4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SSX8Q7RTT4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSX8Q7RTT4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSX8Q7RTT4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.77■□□□□ 0.76
SSX8Q7RTT4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SSX8Q7RTT4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SSX8Q7RTT4 AC110285.6-201ENST00000617652 491 ntBASIC19.77■□□□□ 0.76
SSX8Q7RTT4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SSX8Q7RTT4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.76■□□□□ 0.75
SSX8Q7RTT4 AC141586.4-201ENST00000624558 1573 ntBASIC19.76■□□□□ 0.75
SSX8Q7RTT4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.76■□□□□ 0.75
SSX8Q7RTT4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSX8Q7RTT4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSX8Q7RTT4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SSX8Q7RTT4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.76■□□□□ 0.75
SSX8Q7RTT4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSX8Q7RTT4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
SSX8Q7RTT4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSX8Q7RTT4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.75■□□□□ 0.75
SSX8Q7RTT4 SYT6-210ENST00000641643 1587 ntBASIC19.75■□□□□ 0.75
SSX8Q7RTT4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.75■□□□□ 0.75
SSX8Q7RTT4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSX8Q7RTT4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.75■□□□□ 0.75
SSX8Q7RTT4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
SSX8Q7RTT4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SSX8Q7RTT4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSX8Q7RTT4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms