Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
LINC01554Q52M75 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC01554Q52M75 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01554Q52M75 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01554Q52M75 AP004833.2-201ENST00000532228 1454 ntBASIC11.44□□□□□ -0.58
LINC01554Q52M75 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
LINC01554Q52M75 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC01554Q52M75 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01554Q52M75 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01554Q52M75 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01554Q52M75 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01554Q52M75 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01554Q52M75 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01554Q52M75 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
LINC01554Q52M75 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01554Q52M75 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01554Q52M75 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
LINC01554Q52M75 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01554Q52M75 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC01554Q52M75 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01554Q52M75 AC073130.3-201ENST00000624389 2278 ntBASIC11.44□□□□□ -0.58
LINC01554Q52M75 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01554Q52M75 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01554Q52M75 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01554Q52M75 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
LINC01554Q52M75 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01554Q52M75 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01554Q52M75 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01554Q52M75 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
LINC01554Q52M75 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01554Q52M75 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC11.43□□□□□ -0.58
LINC01554Q52M75 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01554Q52M75 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC11.43□□□□□ -0.58
LINC01554Q52M75 AC007952.6-201ENST00000573168 2673 ntBASIC11.43□□□□□ -0.58
LINC01554Q52M75 AC003957.1-201ENST00000625108 2673 ntBASIC11.43□□□□□ -0.58
LINC01554Q52M75 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC11.43□□□□□ -0.58
LINC01554Q52M75 AC091060.1-201ENST00000623524 1766 ntBASIC11.43□□□□□ -0.58
LINC01554Q52M75 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
LINC01554Q52M75 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01554Q52M75 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01554Q52M75 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
LINC01554Q52M75 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
LINC01554Q52M75 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01554Q52M75 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01554Q52M75 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01554Q52M75 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01554Q52M75 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01554Q52M75 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01554Q52M75 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01554Q52M75 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC11.42□□□□□ -0.58
LINC01554Q52M75 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01554Q52M75 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC11.42□□□□□ -0.58
LINC01554Q52M75 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
LINC01554Q52M75 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01554Q52M75 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
LINC01554Q52M75 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01554Q52M75 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
LINC01554Q52M75 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01554Q52M75 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC11.42□□□□□ -0.58
LINC01554Q52M75 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01554Q52M75 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01554Q52M75 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01554Q52M75 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01554Q52M75 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01554Q52M75 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01554Q52M75 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC01554Q52M75 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01554Q52M75 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01554Q52M75 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01554Q52M75 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01554Q52M75 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01554Q52M75 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC11.41□□□□□ -0.58
LINC01554Q52M75 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01554Q52M75 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01554Q52M75 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01554Q52M75 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC11.41□□□□□ -0.58
LINC01554Q52M75 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01554Q52M75 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01554Q52M75 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01554Q52M75 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC01554Q52M75 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01554Q52M75 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01554Q52M75 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01554Q52M75 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC11.4□□□□□ -0.58
LINC01554Q52M75 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC11.4□□□□□ -0.58
LINC01554Q52M75 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC11.4□□□□□ -0.58
LINC01554Q52M75 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01554Q52M75 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01554Q52M75 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
LINC01554Q52M75 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC11.4□□□□□ -0.58
LINC01554Q52M75 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01554Q52M75 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01554Q52M75 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01554Q52M75 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01554Q52M75 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC11.4□□□□□ -0.58
LINC01554Q52M75 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01554Q52M75 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01554Q52M75 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
LINC01554Q52M75 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01554Q52M75 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms