Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6AP1LQ52LC2 LONRF2P2-201ENST00000439212 571 ntBASIC22.06■■□□□ 1.12
ATP6AP1LQ52LC2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
ATP6AP1LQ52LC2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6AP1LQ52LC2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.06■■□□□ 1.12
ATP6AP1LQ52LC2 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
ATP6AP1LQ52LC2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.05■■□□□ 1.12
ATP6AP1LQ52LC2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.05■■□□□ 1.12
ATP6AP1LQ52LC2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
ATP6AP1LQ52LC2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ATP6AP1LQ52LC2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ATP6AP1LQ52LC2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6AP1LQ52LC2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
ATP6AP1LQ52LC2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.04■■□□□ 1.12
ATP6AP1LQ52LC2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.04■■□□□ 1.12
ATP6AP1LQ52LC2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.04■■□□□ 1.12
ATP6AP1LQ52LC2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6AP1LQ52LC2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6AP1LQ52LC2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.04■■□□□ 1.12
ATP6AP1LQ52LC2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.04■■□□□ 1.12
ATP6AP1LQ52LC2 ANOS2P-203ENST00000472227 1816 ntBASIC22.03■■□□□ 1.12
ATP6AP1LQ52LC2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6AP1LQ52LC2 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6AP1LQ52LC2 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6AP1LQ52LC2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.03■■□□□ 1.12
ATP6AP1LQ52LC2 AL022069.1-201ENST00000568025 1636 ntBASIC22.03■■□□□ 1.12
ATP6AP1LQ52LC2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6AP1LQ52LC2 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6AP1LQ52LC2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
ATP6AP1LQ52LC2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.03■■□□□ 1.12
ATP6AP1LQ52LC2 U85056.1-201ENST00000616429 682 ntBASIC22.03■■□□□ 1.12
ATP6AP1LQ52LC2 AC129492.7-201ENST00000622992 756 ntBASIC22.03■■□□□ 1.12
ATP6AP1LQ52LC2 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.03■■□□□ 1.12
ATP6AP1LQ52LC2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
ATP6AP1LQ52LC2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.03■■□□□ 1.12
ATP6AP1LQ52LC2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.03■■□□□ 1.12
ATP6AP1LQ52LC2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6AP1LQ52LC2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6AP1LQ52LC2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.02■■□□□ 1.12
ATP6AP1LQ52LC2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.02■■□□□ 1.12
ATP6AP1LQ52LC2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
ATP6AP1LQ52LC2 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6AP1LQ52LC2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
ATP6AP1LQ52LC2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.02■■□□□ 1.12
ATP6AP1LQ52LC2 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.02■■□□□ 1.12
ATP6AP1LQ52LC2 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.02■■□□□ 1.12
ATP6AP1LQ52LC2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
ATP6AP1LQ52LC2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6AP1LQ52LC2 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6AP1LQ52LC2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
ATP6AP1LQ52LC2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6AP1LQ52LC2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
ATP6AP1LQ52LC2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.02■■□□□ 1.11
ATP6AP1LQ52LC2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6AP1LQ52LC2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6AP1LQ52LC2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6AP1LQ52LC2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
ATP6AP1LQ52LC2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6AP1LQ52LC2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6AP1LQ52LC2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
ATP6AP1LQ52LC2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.01■■□□□ 1.11
ATP6AP1LQ52LC2 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.01■■□□□ 1.11
ATP6AP1LQ52LC2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
ATP6AP1LQ52LC2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6AP1LQ52LC2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6AP1LQ52LC2 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6AP1LQ52LC2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.01■■□□□ 1.11
ATP6AP1LQ52LC2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
ATP6AP1LQ52LC2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6AP1LQ52LC2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6AP1LQ52LC2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
ATP6AP1LQ52LC2 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
ATP6AP1LQ52LC2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ATP6AP1LQ52LC2 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22■■□□□ 1.11
ATP6AP1LQ52LC2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22■■□□□ 1.11
ATP6AP1LQ52LC2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
ATP6AP1LQ52LC2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
ATP6AP1LQ52LC2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22■■□□□ 1.11
ATP6AP1LQ52LC2 AC011551.1-201ENST00000614101 683 ntBASIC22■■□□□ 1.11
ATP6AP1LQ52LC2 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ATP6AP1LQ52LC2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22■■□□□ 1.11
ATP6AP1LQ52LC2 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ATP6AP1LQ52LC2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6AP1LQ52LC2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.99■■□□□ 1.11
ATP6AP1LQ52LC2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6AP1LQ52LC2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6AP1LQ52LC2 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.99■■□□□ 1.11
ATP6AP1LQ52LC2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6AP1LQ52LC2 HSD17B1P1-201ENST00000590052 955 ntBASIC21.99■■□□□ 1.11
ATP6AP1LQ52LC2 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
ATP6AP1LQ52LC2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6AP1LQ52LC2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6AP1LQ52LC2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATP6AP1LQ52LC2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATP6AP1LQ52LC2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATP6AP1LQ52LC2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATP6AP1LQ52LC2 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.98■■□□□ 1.11
ATP6AP1LQ52LC2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
ATP6AP1LQ52LC2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
ATP6AP1LQ52LC2 AC092068.2-201ENST00000590491 1708 ntBASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms