Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CXCR4P61073 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.87■□□□□ 0.93
CXCR4P61073 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.87■□□□□ 0.93
CXCR4P61073 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CXCR4P61073 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CXCR4P61073 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CXCR4P61073 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CXCR4P61073 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CXCR4P61073 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CXCR4P61073 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CXCR4P61073 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CXCR4P61073 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CXCR4P61073 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CXCR4P61073 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CXCR4P61073 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CXCR4P61073 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CXCR4P61073 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CXCR4P61073 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CXCR4P61073 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CXCR4P61073 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CXCR4P61073 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CXCR4P61073 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CXCR4P61073 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.86■□□□□ 0.93
CXCR4P61073 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CXCR4P61073 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CXCR4P61073 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.86■□□□□ 0.93
CXCR4P61073 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.86■□□□□ 0.93
CXCR4P61073 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CXCR4P61073 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CXCR4P61073 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CXCR4P61073 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.85■□□□□ 0.93
CXCR4P61073 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CXCR4P61073 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.85■□□□□ 0.93
CXCR4P61073 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CXCR4P61073 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.85■□□□□ 0.93
CXCR4P61073 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CXCR4P61073 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CXCR4P61073 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CXCR4P61073 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CXCR4P61073 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CXCR4P61073 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CXCR4P61073 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CXCR4P61073 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CXCR4P61073 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CXCR4P61073 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CXCR4P61073 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CXCR4P61073 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CXCR4P61073 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CXCR4P61073 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.84■□□□□ 0.93
CXCR4P61073 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
CXCR4P61073 AL024507.2-201ENST00000606070 2574 ntBASIC20.84■□□□□ 0.93
CXCR4P61073 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CXCR4P61073 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.83■□□□□ 0.93
CXCR4P61073 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CXCR4P61073 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.83■□□□□ 0.93
CXCR4P61073 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CXCR4P61073 AC092296.2-201ENST00000589470 999 ntBASIC20.83■□□□□ 0.93
CXCR4P61073 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CXCR4P61073 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CXCR4P61073 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CXCR4P61073 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.83■□□□□ 0.92
CXCR4P61073 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.82■□□□□ 0.92
CXCR4P61073 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CXCR4P61073 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CXCR4P61073 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CXCR4P61073 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CXCR4P61073 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.82■□□□□ 0.92
CXCR4P61073 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CXCR4P61073 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CXCR4P61073 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CXCR4P61073 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CXCR4P61073 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.82■□□□□ 0.92
CXCR4P61073 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CXCR4P61073 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CXCR4P61073 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CXCR4P61073 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CXCR4P61073 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CXCR4P61073 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CXCR4P61073 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CXCR4P61073 FOXO3B-201ENST00000395675 1928 ntBASIC20.81■□□□□ 0.92
CXCR4P61073 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CXCR4P61073 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CXCR4P61073 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CXCR4P61073 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CXCR4P61073 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CXCR4P61073 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CXCR4P61073 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.8■□□□□ 0.92
CXCR4P61073 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.8■□□□□ 0.92
CXCR4P61073 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CXCR4P61073 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CXCR4P61073 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CXCR4P61073 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CXCR4P61073 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CXCR4P61073 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CXCR4P61073 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CXCR4P61073 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CXCR4P61073 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
CXCR4P61073 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CXCR4P61073 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.79■□□□□ 0.92
CXCR4P61073 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms