Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42P60953 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.87■□□□□ 0.93
CDC42P60953 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.87■□□□□ 0.93
CDC42P60953 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42P60953 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CDC42P60953 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CDC42P60953 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CDC42P60953 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.86■□□□□ 0.93
CDC42P60953 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42P60953 AC093536.1-201ENST00000569153 554 ntBASIC20.86■□□□□ 0.93
CDC42P60953 AC092296.2-201ENST00000589470 999 ntBASIC20.86■□□□□ 0.93
CDC42P60953 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42P60953 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42P60953 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CDC42P60953 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CDC42P60953 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.85■□□□□ 0.93
CDC42P60953 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDC42P60953 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDC42P60953 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CDC42P60953 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.85■□□□□ 0.93
CDC42P60953 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.85■□□□□ 0.93
CDC42P60953 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.85■□□□□ 0.93
CDC42P60953 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDC42P60953 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDC42P60953 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDC42P60953 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDC42P60953 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CDC42P60953 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDC42P60953 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.84■□□□□ 0.93
CDC42P60953 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.84■□□□□ 0.93
CDC42P60953 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CDC42P60953 LINC00565-201ENST00000562710 2331 ntBASIC20.84■□□□□ 0.93
CDC42P60953 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CDC42P60953 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CDC42P60953 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDC42P60953 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDC42P60953 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDC42P60953 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDC42P60953 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDC42P60953 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDC42P60953 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDC42P60953 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.83■□□□□ 0.93
CDC42P60953 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CDC42P60953 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDC42P60953 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDC42P60953 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CDC42P60953 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDC42P60953 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.82■□□□□ 0.92
CDC42P60953 C1orf229-201ENST00000623686 2258 ntBASIC20.82■□□□□ 0.92
CDC42P60953 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDC42P60953 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CDC42P60953 ECEL1P2-201ENST00000461596 1295 ntBASIC20.82■□□□□ 0.92
CDC42P60953 AC016575.1-201ENST00000607026 382 ntBASIC20.82■□□□□ 0.92
CDC42P60953 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.82■□□□□ 0.92
CDC42P60953 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDC42P60953 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDC42P60953 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDC42P60953 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CDC42P60953 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDC42P60953 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDC42P60953 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CDC42P60953 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDC42P60953 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDC42P60953 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDC42P60953 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDC42P60953 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDC42P60953 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDC42P60953 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDC42P60953 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CDC42P60953 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.8■□□□□ 0.92
CDC42P60953 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDC42P60953 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CDC42P60953 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.8■□□□□ 0.92
CDC42P60953 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDC42P60953 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDC42P60953 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDC42P60953 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDC42P60953 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDC42P60953 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDC42P60953 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDC42P60953 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDC42P60953 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDC42P60953 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDC42P60953 AL161729.1-201ENST00000604104 1402 ntBASIC20.79■□□□□ 0.92
CDC42P60953 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CDC42P60953 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CDC42P60953 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CDC42P60953 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDC42P60953 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDC42P60953 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDC42P60953 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.79■□□□□ 0.92
CDC42P60953 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDC42P60953 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.79■□□□□ 0.92
CDC42P60953 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CDC42P60953 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDC42P60953 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDC42P60953 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
CDC42P60953 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CDC42P60953 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CDC42P60953 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms