Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CLDN18P56856 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.56■□□□□ 0.88
CLDN18P56856 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.56■□□□□ 0.88
CLDN18P56856 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN18P56856 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN18P56856 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.55■□□□□ 0.88
CLDN18P56856 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
CLDN18P56856 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.55■□□□□ 0.88
CLDN18P56856 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.55■□□□□ 0.88
CLDN18P56856 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN18P56856 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN18P56856 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN18P56856 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN18P56856 MIR4466-201ENST00000606121 54 ntBASIC20.55■□□□□ 0.88
CLDN18P56856 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN18P56856 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN18P56856 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN18P56856 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN18P56856 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.55■□□□□ 0.88
CLDN18P56856 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN18P56856 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN18P56856 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN18P56856 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.54■□□□□ 0.88
CLDN18P56856 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN18P56856 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN18P56856 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CLDN18P56856 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.54■□□□□ 0.88
CLDN18P56856 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN18P56856 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN18P56856 AL136116.3-201ENST00000402907 1138 ntBASIC20.53■□□□□ 0.88
CLDN18P56856 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
CLDN18P56856 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN18P56856 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN18P56856 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN18P56856 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CLDN18P56856 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CLDN18P56856 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CLDN18P56856 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.52■□□□□ 0.88
CLDN18P56856 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.52■□□□□ 0.88
CLDN18P56856 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CLDN18P56856 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN18P56856 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CLDN18P56856 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN18P56856 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.51■□□□□ 0.87
CLDN18P56856 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN18P56856 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.51■□□□□ 0.87
CLDN18P56856 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN18P56856 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.51■□□□□ 0.87
CLDN18P56856 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN18P56856 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN18P56856 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN18P56856 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CLDN18P56856 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN18P56856 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN18P56856 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CLDN18P56856 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN18P56856 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CLDN18P56856 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.5■□□□□ 0.87
CLDN18P56856 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.5■□□□□ 0.87
CLDN18P56856 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.5■□□□□ 0.87
CLDN18P56856 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.5■□□□□ 0.87
CLDN18P56856 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CLDN18P56856 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN18P56856 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CLDN18P56856 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN18P56856 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN18P56856 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN18P56856 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.49■□□□□ 0.87
CLDN18P56856 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN18P56856 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN18P56856 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.49■□□□□ 0.87
CLDN18P56856 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN18P56856 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.48■□□□□ 0.87
CLDN18P56856 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN18P56856 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN18P56856 ALDH1A3-203ENST00000557963 1670 ntBASIC20.48■□□□□ 0.87
CLDN18P56856 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN18P56856 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN18P56856 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN18P56856 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CLDN18P56856 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CLDN18P56856 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.47■□□□□ 0.87
CLDN18P56856 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN18P56856 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN18P56856 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN18P56856 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.46■□□□□ 0.87
CLDN18P56856 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.46■□□□□ 0.87
CLDN18P56856 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN18P56856 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN18P56856 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.46■□□□□ 0.87
CLDN18P56856 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN18P56856 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN18P56856 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN18P56856 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN18P56856 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.46■□□□□ 0.87
CLDN18P56856 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN18P56856 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.45■□□□□ 0.86
CLDN18P56856 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CLDN18P56856 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN18P56856 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms