Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CX3CR1P49238 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.04■□□□□ 0.8
CX3CR1P49238 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.04■□□□□ 0.8
CX3CR1P49238 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.04■□□□□ 0.8
CX3CR1P49238 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.04■□□□□ 0.8
CX3CR1P49238 AC074183.2-201ENST00000623112 922 ntBASIC20.04■□□□□ 0.8
CX3CR1P49238 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.04■□□□□ 0.8
CX3CR1P49238 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.04■□□□□ 0.8
CX3CR1P49238 AL022069.1-201ENST00000568025 1636 ntBASIC20.04■□□□□ 0.8
CX3CR1P49238 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CX3CR1P49238 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CX3CR1P49238 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CX3CR1P49238 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CX3CR1P49238 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CX3CR1P49238 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.03■□□□□ 0.8
CX3CR1P49238 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CX3CR1P49238 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CX3CR1P49238 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.03■□□□□ 0.8
CX3CR1P49238 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CX3CR1P49238 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CX3CR1P49238 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CX3CR1P49238 AC010980.1-201ENST00000587192 1142 ntBASIC20.02■□□□□ 0.8
CX3CR1P49238 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CX3CR1P49238 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CX3CR1P49238 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CX3CR1P49238 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CX3CR1P49238 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CX3CR1P49238 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CX3CR1P49238 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
CX3CR1P49238 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CX3CR1P49238 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CX3CR1P49238 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
CX3CR1P49238 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CX3CR1P49238 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CX3CR1P49238 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.01■□□□□ 0.79
CX3CR1P49238 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CX3CR1P49238 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CX3CR1P49238 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.01■□□□□ 0.79
CX3CR1P49238 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.01■□□□□ 0.79
CX3CR1P49238 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.01■□□□□ 0.79
CX3CR1P49238 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.01■□□□□ 0.79
CX3CR1P49238 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.01■□□□□ 0.79
CX3CR1P49238 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CX3CR1P49238 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CX3CR1P49238 DUSP8P5-201ENST00000422884 1815 ntBASIC20.01■□□□□ 0.79
CX3CR1P49238 AC068473.5-201ENST00000616428 2072 ntBASIC20.01■□□□□ 0.79
CX3CR1P49238 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CX3CR1P49238 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CX3CR1P49238 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20■□□□□ 0.79
CX3CR1P49238 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20■□□□□ 0.79
CX3CR1P49238 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20■□□□□ 0.79
CX3CR1P49238 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20■□□□□ 0.79
CX3CR1P49238 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20■□□□□ 0.79
CX3CR1P49238 AC120024.1-201ENST00000562672 995 ntBASIC20■□□□□ 0.79
CX3CR1P49238 PVT1_1.1-201ENST00000615125 194 ntBASIC20■□□□□ 0.79
CX3CR1P49238 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20■□□□□ 0.79
CX3CR1P49238 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20■□□□□ 0.79
CX3CR1P49238 AC012354.3-201ENST00000623734 483 ntBASIC20■□□□□ 0.79
CX3CR1P49238 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CX3CR1P49238 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CX3CR1P49238 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CX3CR1P49238 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20■□□□□ 0.79
CX3CR1P49238 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20■□□□□ 0.79
CX3CR1P49238 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CX3CR1P49238 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.99■□□□□ 0.79
CX3CR1P49238 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CX3CR1P49238 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.99■□□□□ 0.79
CX3CR1P49238 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CX3CR1P49238 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CX3CR1P49238 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.99■□□□□ 0.79
CX3CR1P49238 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.99■□□□□ 0.79
CX3CR1P49238 AC079834.2-201ENST00000609776 1949 ntBASIC19.99■□□□□ 0.79
CX3CR1P49238 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CX3CR1P49238 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CX3CR1P49238 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CX3CR1P49238 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.99■□□□□ 0.79
CX3CR1P49238 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CX3CR1P49238 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.98■□□□□ 0.79
CX3CR1P49238 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CX3CR1P49238 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CX3CR1P49238 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CX3CR1P49238 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.97■□□□□ 0.79
CX3CR1P49238 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CX3CR1P49238 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.97■□□□□ 0.79
CX3CR1P49238 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.97■□□□□ 0.79
CX3CR1P49238 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.97■□□□□ 0.79
CX3CR1P49238 THA1P-201ENST00000590384 1145 ntBASIC19.97■□□□□ 0.79
CX3CR1P49238 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CX3CR1P49238 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CX3CR1P49238 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CX3CR1P49238 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CX3CR1P49238 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CX3CR1P49238 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CX3CR1P49238 AC131274.2-201ENST00000580697 1507 ntBASIC19.97■□□□□ 0.79
CX3CR1P49238 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.96■□□□□ 0.79
CX3CR1P49238 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CX3CR1P49238 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.96■□□□□ 0.79
CX3CR1P49238 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CX3CR1P49238 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.96■□□□□ 0.79
CX3CR1P49238 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms