Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL8A2P25067 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL8A2P25067 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL8A2P25067 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.36■□□□□ 0.69
COL8A2P25067 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL8A2P25067 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.36■□□□□ 0.69
COL8A2P25067 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL8A2P25067 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.36■□□□□ 0.69
COL8A2P25067 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.35■□□□□ 0.69
COL8A2P25067 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL8A2P25067 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL8A2P25067 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL8A2P25067 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL8A2P25067 AC005703.6-201ENST00000623265 1329 ntBASIC19.35■□□□□ 0.69
COL8A2P25067 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL8A2P25067 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL8A2P25067 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.35■□□□□ 0.69
COL8A2P25067 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL8A2P25067 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
COL8A2P25067 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL8A2P25067 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL8A2P25067 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
COL8A2P25067 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL8A2P25067 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL8A2P25067 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL8A2P25067 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.34■□□□□ 0.69
COL8A2P25067 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL8A2P25067 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.34■□□□□ 0.69
COL8A2P25067 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
COL8A2P25067 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.34■□□□□ 0.69
COL8A2P25067 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL8A2P25067 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL8A2P25067 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.34■□□□□ 0.69
COL8A2P25067 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL8A2P25067 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL8A2P25067 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
COL8A2P25067 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
COL8A2P25067 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
COL8A2P25067 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.33■□□□□ 0.69
COL8A2P25067 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL8A2P25067 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
COL8A2P25067 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL8A2P25067 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL8A2P25067 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL8A2P25067 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.68
COL8A2P25067 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL8A2P25067 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL8A2P25067 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL8A2P25067 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.32■□□□□ 0.68
COL8A2P25067 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.32■□□□□ 0.68
COL8A2P25067 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL8A2P25067 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.32■□□□□ 0.68
COL8A2P25067 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL8A2P25067 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL8A2P25067 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL8A2P25067 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.32■□□□□ 0.68
COL8A2P25067 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL8A2P25067 AC019069.1-201ENST00000610008 1333 ntBASIC19.31■□□□□ 0.68
COL8A2P25067 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL8A2P25067 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL8A2P25067 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL8A2P25067 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL8A2P25067 AL139246.5-201ENST00000606645 996 ntBASIC19.31■□□□□ 0.68
COL8A2P25067 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
COL8A2P25067 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL8A2P25067 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL8A2P25067 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL8A2P25067 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL8A2P25067 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL8A2P25067 AC096631.2-201ENST00000436136 790 ntBASIC19.3■□□□□ 0.68
COL8A2P25067 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.3■□□□□ 0.68
COL8A2P25067 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL8A2P25067 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.3■□□□□ 0.68
COL8A2P25067 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL8A2P25067 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.3■□□□□ 0.68
COL8A2P25067 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL8A2P25067 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL8A2P25067 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.3■□□□□ 0.68
COL8A2P25067 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL8A2P25067 AP003733.4-201ENST00000623785 1697 ntBASIC19.3■□□□□ 0.68
COL8A2P25067 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL8A2P25067 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL8A2P25067 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL8A2P25067 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL8A2P25067 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL8A2P25067 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL8A2P25067 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL8A2P25067 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL8A2P25067 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
COL8A2P25067 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.28■□□□□ 0.68
COL8A2P25067 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL8A2P25067 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL8A2P25067 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.28■□□□□ 0.68
COL8A2P25067 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.28■□□□□ 0.68
COL8A2P25067 AC110285.6-201ENST00000617652 491 ntBASIC19.28■□□□□ 0.68
COL8A2P25067 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL8A2P25067 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL8A2P25067 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL8A2P25067 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL8A2P25067 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms