Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.85■□□□□ 0.93
BMP4P12644 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.85■□□□□ 0.93
BMP4P12644 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BMP4P12644 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BMP4P12644 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BMP4P12644 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BMP4P12644 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BMP4P12644 RARRES2P1-201ENST00000474487 481 ntBASIC20.84■□□□□ 0.93
BMP4P12644 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BMP4P12644 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BMP4P12644 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
BMP4P12644 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
BMP4P12644 SLC6A10P-202ENST00000431994 2058 ntBASIC20.83■□□□□ 0.93
BMP4P12644 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.83■□□□□ 0.93
BMP4P12644 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
BMP4P12644 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
BMP4P12644 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
BMP4P12644 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BMP4P12644 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.82■□□□□ 0.92
BMP4P12644 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.82■□□□□ 0.92
BMP4P12644 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
BMP4P12644 KRT18P10-201ENST00000388836 1287 ntBASIC20.82■□□□□ 0.92
BMP4P12644 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BMP4P12644 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.82■□□□□ 0.92
BMP4P12644 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BMP4P12644 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BMP4P12644 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.82■□□□□ 0.92
BMP4P12644 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
BMP4P12644 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.81■□□□□ 0.92
BMP4P12644 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
BMP4P12644 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.81■□□□□ 0.92
BMP4P12644 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.81■□□□□ 0.92
BMP4P12644 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BMP4P12644 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
BMP4P12644 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.81■□□□□ 0.92
BMP4P12644 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BMP4P12644 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.81■□□□□ 0.92
BMP4P12644 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.81■□□□□ 0.92
BMP4P12644 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
BMP4P12644 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BMP4P12644 AC007375.3-201ENST00000600936 2314 ntBASIC20.81■□□□□ 0.92
BMP4P12644 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BMP4P12644 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BMP4P12644 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
BMP4P12644 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
BMP4P12644 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BMP4P12644 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
BMP4P12644 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BMP4P12644 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
BMP4P12644 YBX1P4-201ENST00000392794 808 ntBASIC20.8■□□□□ 0.92
BMP4P12644 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BMP4P12644 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BMP4P12644 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
BMP4P12644 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BMP4P12644 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.79■□□□□ 0.92
BMP4P12644 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
BMP4P12644 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
BMP4P12644 SLC25A24-204ENST00000569674 2357 ntBASIC20.79■□□□□ 0.92
BMP4P12644 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.79■□□□□ 0.92
BMP4P12644 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.79■□□□□ 0.92
BMP4P12644 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
BMP4P12644 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BMP4P12644 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.79■□□□□ 0.92
BMP4P12644 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.78■□□□□ 0.92
BMP4P12644 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BMP4P12644 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BMP4P12644 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BMP4P12644 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BMP4P12644 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.78■□□□□ 0.92
BMP4P12644 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.78■□□□□ 0.92
BMP4P12644 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.78■□□□□ 0.92
BMP4P12644 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.78■□□□□ 0.92
BMP4P12644 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BMP4P12644 AC137767.1-201ENST00000602918 1920 ntBASIC20.78■□□□□ 0.92
BMP4P12644 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BMP4P12644 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
BMP4P12644 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
BMP4P12644 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BMP4P12644 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.77■□□□□ 0.92
BMP4P12644 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
BMP4P12644 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.77■□□□□ 0.92
BMP4P12644 SPCS2P3-201ENST00000500401 656 ntBASIC20.77■□□□□ 0.92
BMP4P12644 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
BMP4P12644 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BMP4P12644 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
BMP4P12644 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.77■□□□□ 0.91
BMP4P12644 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BMP4P12644 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
BMP4P12644 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BMP4P12644 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.76■□□□□ 0.91
BMP4P12644 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.76■□□□□ 0.91
BMP4P12644 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
BMP4P12644 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
BMP4P12644 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.76■□□□□ 0.91
BMP4P12644 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BMP4P12644 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
BMP4P12644 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
BMP4P12644 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BMP4P12644 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.75■□□□□ 0.91
BMP4P12644 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms