Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GYPBP06028 U85056.1-201ENST00000616429 682 ntBASIC20.51■□□□□ 0.87
GYPBP06028 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.51■□□□□ 0.87
GYPBP06028 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GYPBP06028 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GYPBP06028 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GYPBP06028 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GYPBP06028 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GYPBP06028 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
GYPBP06028 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
GYPBP06028 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
GYPBP06028 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GYPBP06028 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GYPBP06028 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.5■□□□□ 0.87
GYPBP06028 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.5■□□□□ 0.87
GYPBP06028 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.5■□□□□ 0.87
GYPBP06028 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
GYPBP06028 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.5■□□□□ 0.87
GYPBP06028 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
GYPBP06028 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
GYPBP06028 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.49■□□□□ 0.87
GYPBP06028 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GYPBP06028 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GYPBP06028 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
GYPBP06028 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GYPBP06028 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GYPBP06028 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.49■□□□□ 0.87
GYPBP06028 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
GYPBP06028 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
GYPBP06028 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GYPBP06028 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GYPBP06028 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GYPBP06028 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
GYPBP06028 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GYPBP06028 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GYPBP06028 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.48■□□□□ 0.87
GYPBP06028 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
GYPBP06028 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
GYPBP06028 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GYPBP06028 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.47■□□□□ 0.87
GYPBP06028 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.47■□□□□ 0.87
GYPBP06028 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
GYPBP06028 AC129492.7-201ENST00000622992 756 ntBASIC20.47■□□□□ 0.87
GYPBP06028 ANOS2P-203ENST00000472227 1816 ntBASIC20.47■□□□□ 0.87
GYPBP06028 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.47■□□□□ 0.87
GYPBP06028 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GYPBP06028 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GYPBP06028 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GYPBP06028 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.46■□□□□ 0.87
GYPBP06028 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
GYPBP06028 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.46■□□□□ 0.87
GYPBP06028 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.46■□□□□ 0.87
GYPBP06028 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.46■□□□□ 0.87
GYPBP06028 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
GYPBP06028 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.46■□□□□ 0.87
GYPBP06028 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
GYPBP06028 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GYPBP06028 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.46■□□□□ 0.87
GYPBP06028 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GYPBP06028 LONRF2P2-201ENST00000439212 571 ntBASIC20.45■□□□□ 0.86
GYPBP06028 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.45■□□□□ 0.86
GYPBP06028 HSD17B1P1-201ENST00000590052 955 ntBASIC20.45■□□□□ 0.86
GYPBP06028 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GYPBP06028 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.45■□□□□ 0.86
GYPBP06028 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.45■□□□□ 0.86
GYPBP06028 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
GYPBP06028 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
GYPBP06028 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
GYPBP06028 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.44■□□□□ 0.86
GYPBP06028 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GYPBP06028 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
GYPBP06028 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
GYPBP06028 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GYPBP06028 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
GYPBP06028 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
GYPBP06028 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.44■□□□□ 0.86
GYPBP06028 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.44■□□□□ 0.86
GYPBP06028 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.44■□□□□ 0.86
GYPBP06028 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GYPBP06028 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
GYPBP06028 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GYPBP06028 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GYPBP06028 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.44■□□□□ 0.86
GYPBP06028 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GYPBP06028 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
GYPBP06028 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.43■□□□□ 0.86
GYPBP06028 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GYPBP06028 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GYPBP06028 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GYPBP06028 KRT18P60-201ENST00000312876 1297 ntBASIC20.43■□□□□ 0.86
GYPBP06028 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
GYPBP06028 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GYPBP06028 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GYPBP06028 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.43■□□□□ 0.86
GYPBP06028 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
GYPBP06028 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
GYPBP06028 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GYPBP06028 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GYPBP06028 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
GYPBP06028 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms