Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSPAN9O75954 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSPAN9O75954 AC092667.1-201ENST00000434301 2586 ntBASIC19.43■□□□□ 0.7
TSPAN9O75954 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TSPAN9O75954 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TSPAN9O75954 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.43■□□□□ 0.7
TSPAN9O75954 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TSPAN9O75954 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.43■□□□□ 0.7
TSPAN9O75954 AC018755.3-202ENST00000596210 929 ntBASIC19.43■□□□□ 0.7
TSPAN9O75954 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TSPAN9O75954 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TSPAN9O75954 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TSPAN9O75954 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TSPAN9O75954 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.43■□□□□ 0.7
TSPAN9O75954 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TSPAN9O75954 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TSPAN9O75954 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN9O75954 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN9O75954 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN9O75954 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
TSPAN9O75954 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN9O75954 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN9O75954 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN9O75954 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.42■□□□□ 0.7
TSPAN9O75954 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN9O75954 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.42■□□□□ 0.7
TSPAN9O75954 LINC00565-201ENST00000562710 2331 ntBASIC19.42■□□□□ 0.7
TSPAN9O75954 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN9O75954 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN9O75954 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN9O75954 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN9O75954 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN9O75954 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN9O75954 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TSPAN9O75954 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TSPAN9O75954 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TSPAN9O75954 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.41■□□□□ 0.7
TSPAN9O75954 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TSPAN9O75954 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TSPAN9O75954 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TSPAN9O75954 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TSPAN9O75954 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TSPAN9O75954 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.41■□□□□ 0.7
TSPAN9O75954 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TSPAN9O75954 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TSPAN9O75954 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TSPAN9O75954 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TSPAN9O75954 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TSPAN9O75954 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TSPAN9O75954 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TSPAN9O75954 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.41■□□□□ 0.7
TSPAN9O75954 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.41■□□□□ 0.7
TSPAN9O75954 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TSPAN9O75954 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TSPAN9O75954 AL391422.3-201ENST00000603791 2761 ntBASIC19.4■□□□□ 0.7
TSPAN9O75954 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.4■□□□□ 0.7
TSPAN9O75954 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
TSPAN9O75954 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TSPAN9O75954 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TSPAN9O75954 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TSPAN9O75954 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TSPAN9O75954 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TSPAN9O75954 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TSPAN9O75954 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
TSPAN9O75954 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TSPAN9O75954 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TSPAN9O75954 AF106564.1-201ENST00000607058 2553 ntBASIC19.39■□□□□ 0.7
TSPAN9O75954 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
TSPAN9O75954 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TSPAN9O75954 DUSP8P4-201ENST00000399538 1761 ntBASIC19.39■□□□□ 0.7
TSPAN9O75954 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TSPAN9O75954 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
TSPAN9O75954 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TSPAN9O75954 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TSPAN9O75954 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TSPAN9O75954 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TSPAN9O75954 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TSPAN9O75954 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TSPAN9O75954 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.39■□□□□ 0.69
TSPAN9O75954 AC139795.1-202ENST00000500444 432 ntBASIC19.39■□□□□ 0.69
TSPAN9O75954 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TSPAN9O75954 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TSPAN9O75954 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TSPAN9O75954 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TSPAN9O75954 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TSPAN9O75954 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TSPAN9O75954 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
TSPAN9O75954 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TSPAN9O75954 AC010980.1-201ENST00000587192 1142 ntBASIC19.38■□□□□ 0.69
TSPAN9O75954 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.38■□□□□ 0.69
TSPAN9O75954 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TSPAN9O75954 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.37■□□□□ 0.69
TSPAN9O75954 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TSPAN9O75954 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.37■□□□□ 0.69
TSPAN9O75954 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.37■□□□□ 0.69
TSPAN9O75954 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.37■□□□□ 0.69
TSPAN9O75954 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.37■□□□□ 0.69
TSPAN9O75954 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TSPAN9O75954 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TSPAN9O75954 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms