Protein–RNA interactions for Protein: A0A5A2

TCRBV5S4A2T, V_segment translation product (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S4A2TA0A5A2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC27.56■■■□□ 2
TCRBV5S4A2TA0A5A2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC27.56■■■□□ 2
TCRBV5S4A2TA0A5A2 AL356740.2-201ENST00000601559 647 ntBASIC27.56■■■□□ 2
TCRBV5S4A2TA0A5A2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC27.56■■■□□ 2
TCRBV5S4A2TA0A5A2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC27.56■■■□□ 2
TCRBV5S4A2TA0A5A2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC27.56■■■□□ 2
TCRBV5S4A2TA0A5A2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC27.56■■■□□ 2
TCRBV5S4A2TA0A5A2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
TCRBV5S4A2TA0A5A2 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC27.55■■■□□ 2
TCRBV5S4A2TA0A5A2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
TCRBV5S4A2TA0A5A2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
TCRBV5S4A2TA0A5A2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC27.55■■■□□ 2
TCRBV5S4A2TA0A5A2 AK3-203ENST00000447596 705 ntTSL 2 BASIC27.55■■■□□ 2
TCRBV5S4A2TA0A5A2 MIR4466-201ENST00000606121 54 ntBASIC27.55■■■□□ 2
TCRBV5S4A2TA0A5A2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC27.55■■■□□ 2
TCRBV5S4A2TA0A5A2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC27.55■■■□□ 2
TCRBV5S4A2TA0A5A2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC27.55■■■□□ 2
TCRBV5S4A2TA0A5A2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
TCRBV5S4A2TA0A5A2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
TCRBV5S4A2TA0A5A2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
TCRBV5S4A2TA0A5A2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC27.54■■■□□ 2
TCRBV5S4A2TA0A5A2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC27.54■■■□□ 2
TCRBV5S4A2TA0A5A2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC27.54■■■□□ 2
TCRBV5S4A2TA0A5A2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC27.54■■■□□ 2
TCRBV5S4A2TA0A5A2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC27.54■■■□□ 2
TCRBV5S4A2TA0A5A2 AC005703.6-201ENST00000623265 1329 ntBASIC27.54■■■□□ 2
TCRBV5S4A2TA0A5A2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC27.54■■■□□ 2
TCRBV5S4A2TA0A5A2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
TCRBV5S4A2TA0A5A2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC27.53■■■□□ 2
TCRBV5S4A2TA0A5A2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
TCRBV5S4A2TA0A5A2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
TCRBV5S4A2TA0A5A2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC27.53■■■□□ 2
TCRBV5S4A2TA0A5A2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC27.53■■■□□ 2
TCRBV5S4A2TA0A5A2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC27.53■■■□□ 2
TCRBV5S4A2TA0A5A2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC27.52■■■□□ 2
TCRBV5S4A2TA0A5A2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
TCRBV5S4A2TA0A5A2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC27.52■■■□□ 2
TCRBV5S4A2TA0A5A2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC27.52■■■□□ 2
TCRBV5S4A2TA0A5A2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
TCRBV5S4A2TA0A5A2 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
TCRBV5S4A2TA0A5A2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC27.52■■■□□ 2
TCRBV5S4A2TA0A5A2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
TCRBV5S4A2TA0A5A2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
TCRBV5S4A2TA0A5A2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC27.51■■□□□ 1.99
TCRBV5S4A2TA0A5A2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC27.51■■□□□ 1.99
TCRBV5S4A2TA0A5A2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
TCRBV5S4A2TA0A5A2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
TCRBV5S4A2TA0A5A2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
TCRBV5S4A2TA0A5A2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
TCRBV5S4A2TA0A5A2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
TCRBV5S4A2TA0A5A2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
TCRBV5S4A2TA0A5A2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
TCRBV5S4A2TA0A5A2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
TCRBV5S4A2TA0A5A2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
TCRBV5S4A2TA0A5A2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC27.5■■□□□ 1.99
TCRBV5S4A2TA0A5A2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC27.5■■□□□ 1.99
TCRBV5S4A2TA0A5A2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
TCRBV5S4A2TA0A5A2 LINC01124-201ENST00000409786 2117 ntBASIC27.5■■□□□ 1.99
TCRBV5S4A2TA0A5A2 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC27.5■■□□□ 1.99
TCRBV5S4A2TA0A5A2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
TCRBV5S4A2TA0A5A2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
TCRBV5S4A2TA0A5A2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC27.49■■□□□ 1.99
TCRBV5S4A2TA0A5A2 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC27.49■■□□□ 1.99
TCRBV5S4A2TA0A5A2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC27.49■■□□□ 1.99
TCRBV5S4A2TA0A5A2 LINC00543-201ENST00000567234 1845 ntBASIC27.49■■□□□ 1.99
TCRBV5S4A2TA0A5A2 AC008406.3-201ENST00000620001 1374 ntBASIC27.48■■□□□ 1.99
TCRBV5S4A2TA0A5A2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC27.48■■□□□ 1.99
TCRBV5S4A2TA0A5A2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC27.48■■□□□ 1.99
TCRBV5S4A2TA0A5A2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
TCRBV5S4A2TA0A5A2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
TCRBV5S4A2TA0A5A2 ALDH1A3-203ENST00000557963 1670 ntBASIC27.48■■□□□ 1.99
TCRBV5S4A2TA0A5A2 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TCRBV5S4A2TA0A5A2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TCRBV5S4A2TA0A5A2 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
TCRBV5S4A2TA0A5A2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
TCRBV5S4A2TA0A5A2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
TCRBV5S4A2TA0A5A2 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC27.47■■□□□ 1.99
TCRBV5S4A2TA0A5A2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
TCRBV5S4A2TA0A5A2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC27.46■■□□□ 1.99
TCRBV5S4A2TA0A5A2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC27.46■■□□□ 1.99
TCRBV5S4A2TA0A5A2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
TCRBV5S4A2TA0A5A2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC27.46■■□□□ 1.99
TCRBV5S4A2TA0A5A2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
TCRBV5S4A2TA0A5A2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC27.46■■□□□ 1.99
TCRBV5S4A2TA0A5A2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
TCRBV5S4A2TA0A5A2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
TCRBV5S4A2TA0A5A2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC27.46■■□□□ 1.99
TCRBV5S4A2TA0A5A2 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC27.46■■□□□ 1.99
TCRBV5S4A2TA0A5A2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
TCRBV5S4A2TA0A5A2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC27.45■■□□□ 1.98
TCRBV5S4A2TA0A5A2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
TCRBV5S4A2TA0A5A2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.98
TCRBV5S4A2TA0A5A2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.98
TCRBV5S4A2TA0A5A2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
TCRBV5S4A2TA0A5A2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
TCRBV5S4A2TA0A5A2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC27.44■■□□□ 1.98
TCRBV5S4A2TA0A5A2 AC141586.4-201ENST00000624558 1573 ntBASIC27.44■■□□□ 1.98
TCRBV5S4A2TA0A5A2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
TCRBV5S4A2TA0A5A2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC27.44■■□□□ 1.98
TCRBV5S4A2TA0A5A2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms