Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV8-4A0A0B4J246 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TRAV8-4A0A0B4J246 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-4A0A0B4J246 EED-207ENST00000528180 1745 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV8-4A0A0B4J246 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-4A0A0B4J246 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-4A0A0B4J246 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-4A0A0B4J246 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-4A0A0B4J246 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TRAV8-4A0A0B4J246 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-4A0A0B4J246 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV8-4A0A0B4J246 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRAV8-4A0A0B4J246 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV8-4A0A0B4J246 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-4A0A0B4J246 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-4A0A0B4J246 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV8-4A0A0B4J246 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-4A0A0B4J246 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TRAV8-4A0A0B4J246 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-4A0A0B4J246 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-4A0A0B4J246 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-4A0A0B4J246 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-4A0A0B4J246 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-4A0A0B4J246 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV8-4A0A0B4J246 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-4A0A0B4J246 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-4A0A0B4J246 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAV8-4A0A0B4J246 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TRAV8-4A0A0B4J246 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV8-4A0A0B4J246 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-4A0A0B4J246 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRAV8-4A0A0B4J246 AC138932.1-201ENST00000534164 6830 ntBASIC15.87■□□□□ 0.13
TRAV8-4A0A0B4J246 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-4A0A0B4J246 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV8-4A0A0B4J246 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-4A0A0B4J246 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TRAV8-4A0A0B4J246 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TRAV8-4A0A0B4J246 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-4A0A0B4J246 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC15.86■□□□□ 0.13
TRAV8-4A0A0B4J246 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-4A0A0B4J246 MIR6089-201ENST00000616698 64 ntBASIC15.86■□□□□ 0.13
TRAV8-4A0A0B4J246 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-4A0A0B4J246 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-4A0A0B4J246 FOXO3B-201ENST00000395675 1928 ntBASIC15.86■□□□□ 0.13
TRAV8-4A0A0B4J246 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-4A0A0B4J246 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV8-4A0A0B4J246 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-4A0A0B4J246 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-4A0A0B4J246 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV8-4A0A0B4J246 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-4A0A0B4J246 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV8-4A0A0B4J246 AL592293.1-201ENST00000502889 1188 ntBASIC15.85■□□□□ 0.13
TRAV8-4A0A0B4J246 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC15.85■□□□□ 0.13
TRAV8-4A0A0B4J246 MIR6765-201ENST00000614092 87 ntBASIC15.85■□□□□ 0.13
TRAV8-4A0A0B4J246 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV8-4A0A0B4J246 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-4A0A0B4J246 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
TRAV8-4A0A0B4J246 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV8-4A0A0B4J246 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV8-4A0A0B4J246 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV8-4A0A0B4J246 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV8-4A0A0B4J246 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV8-4A0A0B4J246 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV8-4A0A0B4J246 IDNK-203ENST00000405990 629 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV8-4A0A0B4J246 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC15.84■□□□□ 0.13
TRAV8-4A0A0B4J246 RPS2P7-201ENST00000447334 885 ntBASIC15.84■□□□□ 0.13
TRAV8-4A0A0B4J246 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV8-4A0A0B4J246 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAV8-4A0A0B4J246 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV8-4A0A0B4J246 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV8-4A0A0B4J246 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAV8-4A0A0B4J246 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV8-4A0A0B4J246 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV8-4A0A0B4J246 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV8-4A0A0B4J246 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV8-4A0A0B4J246 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV8-4A0A0B4J246 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAV8-4A0A0B4J246 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV8-4A0A0B4J246 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV8-4A0A0B4J246 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC15.83■□□□□ 0.12
TRAV8-4A0A0B4J246 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV8-4A0A0B4J246 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV8-4A0A0B4J246 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
TRAV8-4A0A0B4J246 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAV8-4A0A0B4J246 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV8-4A0A0B4J246 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV8-4A0A0B4J246 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV8-4A0A0B4J246 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV8-4A0A0B4J246 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV8-4A0A0B4J246 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV8-4A0A0B4J246 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAV8-4A0A0B4J246 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV8-4A0A0B4J246 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV8-4A0A0B4J246 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV8-4A0A0B4J246 AL139125.2-201ENST00000623134 1869 ntBASIC15.82■□□□□ 0.12
TRAV8-4A0A0B4J246 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV8-4A0A0B4J246 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TRAV8-4A0A0B4J246 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV8-4A0A0B4J246 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV8-4A0A0B4J246 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms