Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 AP003733.4-201ENST00000623785 1697 ntBASIC16.4■□□□□ 0.22
TRAV26-1A0A087WT03 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAV26-1A0A087WT03 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRAV26-1A0A087WT03 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV26-1A0A087WT03 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV26-1A0A087WT03 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
TRAV26-1A0A087WT03 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRAV26-1A0A087WT03 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV26-1A0A087WT03 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV26-1A0A087WT03 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV26-1A0A087WT03 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV26-1A0A087WT03 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV26-1A0A087WT03 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV26-1A0A087WT03 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV26-1A0A087WT03 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV26-1A0A087WT03 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV26-1A0A087WT03 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV26-1A0A087WT03 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV26-1A0A087WT03 PRTG-204ENST00000561292 833 ntTSL 3 BASIC16.38■□□□□ 0.21
TRAV26-1A0A087WT03 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV26-1A0A087WT03 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRAV26-1A0A087WT03 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAV26-1A0A087WT03 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV26-1A0A087WT03 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
TRAV26-1A0A087WT03 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV26-1A0A087WT03 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV26-1A0A087WT03 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV26-1A0A087WT03 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV26-1A0A087WT03 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV26-1A0A087WT03 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV26-1A0A087WT03 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV26-1A0A087WT03 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV26-1A0A087WT03 RNF146-205ENST00000477776 762 ntTSL 3 BASIC16.37■□□□□ 0.21
TRAV26-1A0A087WT03 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC16.37■□□□□ 0.21
TRAV26-1A0A087WT03 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAV26-1A0A087WT03 MIR4281-201ENST00000580852 62 ntBASIC16.37■□□□□ 0.21
TRAV26-1A0A087WT03 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV26-1A0A087WT03 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV26-1A0A087WT03 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV26-1A0A087WT03 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV26-1A0A087WT03 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV26-1A0A087WT03 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
TRAV26-1A0A087WT03 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV26-1A0A087WT03 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV26-1A0A087WT03 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV26-1A0A087WT03 AC009299.2-201ENST00000482477 511 ntBASIC16.36■□□□□ 0.21
TRAV26-1A0A087WT03 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAV26-1A0A087WT03 LSR-205ENST00000427250 1606 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV26-1A0A087WT03 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
TRAV26-1A0A087WT03 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV26-1A0A087WT03 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV26-1A0A087WT03 AC138932.3-201ENST00000567634 1902 ntBASIC16.35■□□□□ 0.21
TRAV26-1A0A087WT03 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV26-1A0A087WT03 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV26-1A0A087WT03 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV26-1A0A087WT03 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV26-1A0A087WT03 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV26-1A0A087WT03 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV26-1A0A087WT03 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV26-1A0A087WT03 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC16.35■□□□□ 0.21
TRAV26-1A0A087WT03 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV26-1A0A087WT03 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
TRAV26-1A0A087WT03 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV26-1A0A087WT03 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAV26-1A0A087WT03 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRAV26-1A0A087WT03 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRAV26-1A0A087WT03 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV26-1A0A087WT03 MED17-227ENST00000640521 2047 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAV26-1A0A087WT03 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV26-1A0A087WT03 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV26-1A0A087WT03 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV26-1A0A087WT03 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV26-1A0A087WT03 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV26-1A0A087WT03 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV26-1A0A087WT03 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV26-1A0A087WT03 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV26-1A0A087WT03 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV26-1A0A087WT03 BX664725.1-201ENST00000438252 379 ntBASIC16.34■□□□□ 0.21
TRAV26-1A0A087WT03 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
TRAV26-1A0A087WT03 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAV26-1A0A087WT03 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TRAV26-1A0A087WT03 AL035685.1-201ENST00000636663 812 ntBASIC16.34■□□□□ 0.21
TRAV26-1A0A087WT03 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV26-1A0A087WT03 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV26-1A0A087WT03 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV26-1A0A087WT03 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV26-1A0A087WT03 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAV26-1A0A087WT03 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV26-1A0A087WT03 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV26-1A0A087WT03 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV26-1A0A087WT03 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TRAV26-1A0A087WT03 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV26-1A0A087WT03 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV26-1A0A087WT03 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV26-1A0A087WT03 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV26-1A0A087WT03 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV26-1A0A087WT03 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
TRAV26-1A0A087WT03 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV26-1A0A087WT03 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV26-1A0A087WT03 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms