Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 SNX18-202ENST00000343017 3140 ntBASIC14.05□□□□□ -0.16
CTSFQ9UBX1 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 SALL4P5-201ENST00000419001 1760 ntBASIC14.05□□□□□ -0.16
CTSFQ9UBX1 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 AL354877.1-201ENST00000424412 413 ntBASIC14.05□□□□□ -0.16
CTSFQ9UBX1 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 AC004898.1-201ENST00000451057 766 ntBASIC14.05□□□□□ -0.16
CTSFQ9UBX1 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 AC007663.3-201ENST00000609632 465 ntBASIC14.05□□□□□ -0.16
CTSFQ9UBX1 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 AP002414.2-201ENST00000591780 3365 ntBASIC14.05□□□□□ -0.16
CTSFQ9UBX1 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTSFQ9UBX1 AL137784.3-201ENST00000623858 2288 ntBASIC14.04□□□□□ -0.16
CTSFQ9UBX1 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 TLE1P1-201ENST00000422965 589 ntBASIC14.04□□□□□ -0.16
CTSFQ9UBX1 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.04□□□□□ -0.16
CTSFQ9UBX1 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 AL133338.1-201ENST00000565695 1517 ntBASIC14.04□□□□□ -0.16
CTSFQ9UBX1 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CTSFQ9UBX1 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTSFQ9UBX1 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms