Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 AL136172.1-201ENST00000598590 1394 ntBASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.33■□□□□ 0.05
HCFC1R1Q9NWW0 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.33■□□□□ 0.05
HCFC1R1Q9NWW0 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.33■□□□□ 0.05
HCFC1R1Q9NWW0 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HCFC1R1Q9NWW0 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HCFC1R1Q9NWW0 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HCFC1R1Q9NWW0 ACE3P-201ENST00000423435 1973 ntBASIC15.33■□□□□ 0.05
HCFC1R1Q9NWW0 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 CFL1-206ENST00000527344 962 ntTSL 2 BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 FOS-204ENST00000554617 796 ntTSL 2 BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 PHBP15-201ENST00000574228 665 ntBASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 LINC01783-202ENST00000614408 828 ntBASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 BX284668.2-205ENST00000619677 828 ntBASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
HCFC1R1Q9NWW0 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 PPT1-215ENST00000641471 2368 ntBASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 MRPL37P1-201ENST00000592451 1337 ntBASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 AC074138.1-201ENST00000611182 1303 ntBASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 KRT8P28-201ENST00000433288 1390 ntBASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
HCFC1R1Q9NWW0 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms