Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 OLFML2A-201ENST00000288815 5964 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 AL445250.1-201ENST00000641671 2259 ntBASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 CPT1A-201ENST00000265641 5232 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 KXD1-217ENST00000602094 2738 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 ADGRE2-206ENST00000594294 2325 ntTSL 5 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 MAB21L2-201ENST00000317605 2772 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 CLPB-201ENST00000294053 3240 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 MYO7B-202ENST00000409816 6694 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 SLAMF7-205ENST00000444090 2393 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 POLR3E-201ENST00000299853 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 PRKAG1-205ENST00000547306 1531 ntTSL 5 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 DNASE1-202ENST00000407479 8552 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 COL11A1-202ENST00000358392 7327 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 COG7-201ENST00000307149 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 DYNC1I1-205ENST00000447467 2947 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 BEAN1-207ENST00000564819 2929 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 STK3-218ENST00000617590 2485 ntTSL 5 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 UNC45B-201ENST00000268876 5679 ntAPPRIS P3 TSL 5 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 RPGRIP1-213ENST00000557771 3870 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 NRP1-206ENST00000374867 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 KPNA3-201ENST00000261667 4474 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 STAT5A-209ENST00000588868 3629 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 TRO-201ENST00000173898 4647 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 ATP7B-201ENST00000242839 6638 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 EIF5B-205ENST00000617677 4698 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 PTPRS-201ENST00000262963 4766 ntTSL 5 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 PTPRS-210ENST00000592099 4766 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 PCDHA10-202ENST00000506939 3788 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 RPS2P52-201ENST00000469610 820 ntBASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 Z85996.1-201ENST00000494644 937 ntBASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 U85056.1-201ENST00000616429 682 ntBASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 ZNF300-205ENST00000446148 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 CPNE4-209ENST00000512055 5431 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 KCNH1-201ENST00000271751 8172 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 C8A-201ENST00000361249 2356 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 SCNN1A-203ENST00000360168 3481 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 SLC25A25-201ENST00000373064 3474 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 RAET1K-202ENST00000533735 1883 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 KLK2-201ENST00000325321 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 CAPN1-208ENST00000527323 3086 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 HNF4A-209ENST00000619550 4763 ntTSL 5 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 ZMYND11-203ENST00000381591 4229 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 BARD1-212ENST00000617164 5449 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 RSU1-201ENST00000345264 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 RAPGEF3-201ENST00000389212 3294 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 WDR37-201ENST00000263150 4462 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 TLR12P-201ENST00000413515 2706 ntBASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 GRID1-AS1-203ENST00000630182 2100 ntTSL 2 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 LINC01561-201ENST00000369071 2176 ntBASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 ARHGAP40-202ENST00000373345 2841 ntAPPRIS P5 TSL 5 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms