Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM11Q96F44 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM11Q96F44 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM11Q96F44 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM11Q96F44 MIR661-201ENST00000384842 89 ntBASIC15.8■□□□□ 0.12
TRIM11Q96F44 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.8■□□□□ 0.12
TRIM11Q96F44 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM11Q96F44 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM11Q96F44 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM11Q96F44 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM11Q96F44 FO681548.1-201ENST00000455617 1132 ntBASIC15.8■□□□□ 0.12
TRIM11Q96F44 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM11Q96F44 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.8■□□□□ 0.12
TRIM11Q96F44 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM11Q96F44 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM11Q96F44 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.8■□□□□ 0.12
TRIM11Q96F44 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TRIM11Q96F44 AL033527.5-201ENST00000641382 801 ntBASIC15.8■□□□□ 0.12
TRIM11Q96F44 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM11Q96F44 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM11Q96F44 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TRIM11Q96F44 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM11Q96F44 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM11Q96F44 AC139749.1-202ENST00000617529 3139 ntBASIC15.8■□□□□ 0.12
TRIM11Q96F44 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TRIM11Q96F44 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM11Q96F44 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM11Q96F44 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM11Q96F44 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TRIM11Q96F44 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.8■□□□□ 0.12
TRIM11Q96F44 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TRIM11Q96F44 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM11Q96F44 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM11Q96F44 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM11Q96F44 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM11Q96F44 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM11Q96F44 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM11Q96F44 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM11Q96F44 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM11Q96F44 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM11Q96F44 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TRIM11Q96F44 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM11Q96F44 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TRIM11Q96F44 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRIM11Q96F44 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM11Q96F44 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM11Q96F44 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TRIM11Q96F44 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM11Q96F44 AC236430.1-201ENST00000402231 743 ntBASIC15.79■□□□□ 0.12
TRIM11Q96F44 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.79■□□□□ 0.12
TRIM11Q96F44 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.79■□□□□ 0.12
TRIM11Q96F44 AC245100.3-201ENST00000441281 285 ntBASIC15.79■□□□□ 0.12
TRIM11Q96F44 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.79■□□□□ 0.12
TRIM11Q96F44 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM11Q96F44 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM11Q96F44 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM11Q96F44 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM11Q96F44 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.79■□□□□ 0.12
TRIM11Q96F44 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.79■□□□□ 0.12
TRIM11Q96F44 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.79■□□□□ 0.12
TRIM11Q96F44 TP53TG3HP-202ENST00000569755 579 ntBASIC15.79■□□□□ 0.12
TRIM11Q96F44 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.79■□□□□ 0.12
TRIM11Q96F44 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM11Q96F44 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM11Q96F44 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM11Q96F44 AC027601.5-201ENST00000624065 2482 ntBASIC15.79■□□□□ 0.12
TRIM11Q96F44 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM11Q96F44 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TRIM11Q96F44 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM11Q96F44 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM11Q96F44 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM11Q96F44 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM11Q96F44 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM11Q96F44 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM11Q96F44 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM11Q96F44 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM11Q96F44 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM11Q96F44 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
TRIM11Q96F44 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM11Q96F44 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM11Q96F44 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM11Q96F44 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM11Q96F44 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM11Q96F44 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM11Q96F44 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM11Q96F44 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM11Q96F44 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM11Q96F44 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRIM11Q96F44 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM11Q96F44 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRIM11Q96F44 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
TRIM11Q96F44 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM11Q96F44 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRIM11Q96F44 PID1-202ENST00000392054 2745 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM11Q96F44 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM11Q96F44 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.78■□□□□ 0.12
TRIM11Q96F44 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM11Q96F44 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM11Q96F44 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM11Q96F44 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms