Protein–RNA interactions for Protein: Q96D46

NMD3, 60S ribosomal export protein NMD3, humanhuman

Known RBP Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3Q96D46 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NMD3Q96D46 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
NMD3Q96D46 UXT-AS1-201ENST00000590504 1525 ntBASIC14.25□□□□□ -0.13
NMD3Q96D46 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.25□□□□□ -0.13
NMD3Q96D46 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
NMD3Q96D46 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NMD3Q96D46 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NMD3Q96D46 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NMD3Q96D46 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NMD3Q96D46 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NMD3Q96D46 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.25□□□□□ -0.13
NMD3Q96D46 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NMD3Q96D46 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NMD3Q96D46 PCDHB18P-202ENST00000526308 3197 ntBASIC14.25□□□□□ -0.13
NMD3Q96D46 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.25□□□□□ -0.13
NMD3Q96D46 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NMD3Q96D46 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
NMD3Q96D46 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NMD3Q96D46 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NMD3Q96D46 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NMD3Q96D46 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NMD3Q96D46 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
NMD3Q96D46 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.25□□□□□ -0.13
NMD3Q96D46 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
NMD3Q96D46 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NMD3Q96D46 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NMD3Q96D46 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NMD3Q96D46 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NMD3Q96D46 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NMD3Q96D46 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NMD3Q96D46 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
NMD3Q96D46 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
NMD3Q96D46 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NMD3Q96D46 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NMD3Q96D46 AL627223.1-201ENST00000416693 442 ntBASIC14.25□□□□□ -0.13
NMD3Q96D46 AL645939.2-201ENST00000427340 991 ntBASIC14.25□□□□□ -0.13
NMD3Q96D46 FAM58DP-201ENST00000428076 619 ntBASIC14.25□□□□□ -0.13
NMD3Q96D46 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.25□□□□□ -0.13
NMD3Q96D46 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NMD3Q96D46 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.25□□□□□ -0.13
NMD3Q96D46 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.25□□□□□ -0.13
NMD3Q96D46 AC243562.2-201ENST00000561247 970 ntBASIC14.25□□□□□ -0.13
NMD3Q96D46 RARRES2P9-201ENST00000565168 469 ntBASIC14.25□□□□□ -0.13
NMD3Q96D46 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.25□□□□□ -0.13
NMD3Q96D46 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NMD3Q96D46 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.25□□□□□ -0.13
NMD3Q96D46 AC010327.4-202ENST00000591484 748 ntBASIC14.25□□□□□ -0.13
NMD3Q96D46 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.25□□□□□ -0.13
NMD3Q96D46 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
NMD3Q96D46 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NMD3Q96D46 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NMD3Q96D46 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.25□□□□□ -0.13
NMD3Q96D46 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NMD3Q96D46 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NMD3Q96D46 BNIP3P1-202ENST00000550043 1585 ntBASIC14.25□□□□□ -0.13
NMD3Q96D46 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NMD3Q96D46 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.25□□□□□ -0.13
NMD3Q96D46 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NMD3Q96D46 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NMD3Q96D46 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NMD3Q96D46 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.25□□□□□ -0.13
NMD3Q96D46 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.25□□□□□ -0.13
NMD3Q96D46 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NMD3Q96D46 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NMD3Q96D46 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.25□□□□□ -0.13
NMD3Q96D46 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NMD3Q96D46 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NMD3Q96D46 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.24□□□□□ -0.13
NMD3Q96D46 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.24□□□□□ -0.13
NMD3Q96D46 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC14.24□□□□□ -0.13
NMD3Q96D46 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NMD3Q96D46 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NMD3Q96D46 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.24□□□□□ -0.13
NMD3Q96D46 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.24□□□□□ -0.13
NMD3Q96D46 AL136982.4-201ENST00000437689 1740 ntBASIC14.24□□□□□ -0.13
NMD3Q96D46 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NMD3Q96D46 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.24□□□□□ -0.13
NMD3Q96D46 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NMD3Q96D46 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.24□□□□□ -0.13
NMD3Q96D46 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NMD3Q96D46 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NMD3Q96D46 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NMD3Q96D46 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NMD3Q96D46 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.24□□□□□ -0.13
NMD3Q96D46 GPS2P2-201ENST00000430745 888 ntBASIC14.24□□□□□ -0.13
NMD3Q96D46 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NMD3Q96D46 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.24□□□□□ -0.13
NMD3Q96D46 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.24□□□□□ -0.13
NMD3Q96D46 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.24□□□□□ -0.13
NMD3Q96D46 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NMD3Q96D46 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
NMD3Q96D46 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.24□□□□□ -0.13
NMD3Q96D46 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.24□□□□□ -0.13
NMD3Q96D46 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NMD3Q96D46 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.24□□□□□ -0.13
NMD3Q96D46 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NMD3Q96D46 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NMD3Q96D46 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NMD3Q96D46 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
NMD3Q96D46 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms