Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 TLE1P1-201ENST00000422965 589 ntBASIC15.8■□□□□ 0.12
UBA3Q8TBC4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 KRT223P-202ENST00000449164 1292 ntBASIC15.8■□□□□ 0.12
UBA3Q8TBC4 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 AP005482.1-201ENST00000563722 1273 ntBASIC15.8■□□□□ 0.12
UBA3Q8TBC4 AC073413.1-201ENST00000603927 732 ntBASIC15.8■□□□□ 0.12
UBA3Q8TBC4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 MIR6805-201ENST00000615055 62 ntBASIC15.8■□□□□ 0.12
UBA3Q8TBC4 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 AC007292.2-201ENST00000593524 1812 ntBASIC15.8■□□□□ 0.12
UBA3Q8TBC4 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.8■□□□□ 0.12
UBA3Q8TBC4 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
UBA3Q8TBC4 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 AC140479.7-201ENST00000636301 2332 ntBASIC15.79■□□□□ 0.12
UBA3Q8TBC4 KRT8P4-201ENST00000509735 1454 ntBASIC15.79■□□□□ 0.12
UBA3Q8TBC4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 AP000593.2-201ENST00000542775 1433 ntBASIC15.79■□□□□ 0.12
UBA3Q8TBC4 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 RN7SKP175-201ENST00000408472 289 ntBASIC15.79■□□□□ 0.12
UBA3Q8TBC4 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 RN7SL713P-201ENST00000582127 302 ntBASIC15.79■□□□□ 0.12
UBA3Q8TBC4 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBA3Q8TBC4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBA3Q8TBC4 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UBA3Q8TBC4 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBA3Q8TBC4 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBA3Q8TBC4 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
UBA3Q8TBC4 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBA3Q8TBC4 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBA3Q8TBC4 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.78■□□□□ 0.12
UBA3Q8TBC4 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBA3Q8TBC4 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBA3Q8TBC4 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBA3Q8TBC4 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBA3Q8TBC4 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBA3Q8TBC4 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBA3Q8TBC4 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBA3Q8TBC4 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.78■□□□□ 0.12
UBA3Q8TBC4 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UBA3Q8TBC4 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
UBA3Q8TBC4 AC004945.1-201ENST00000416738 983 ntBASIC15.78■□□□□ 0.12
UBA3Q8TBC4 BNIP3P42-201ENST00000454982 569 ntBASIC15.78■□□□□ 0.12
UBA3Q8TBC4 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UBA3Q8TBC4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UBA3Q8TBC4 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.78■□□□□ 0.12
UBA3Q8TBC4 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms