Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
RPS3AP61247 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
RPS3AP61247 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RPS3AP61247 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
RPS3AP61247 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
RPS3AP61247 AC097359.2-201ENST00000604992 2389 ntBASIC14.12□□□□□ -0.15
RPS3AP61247 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPS3AP61247 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPS3AP61247 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RPS3AP61247 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPS3AP61247 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RPS3AP61247 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.12□□□□□ -0.15
RPS3AP61247 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPS3AP61247 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPS3AP61247 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.12□□□□□ -0.15
RPS3AP61247 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPS3AP61247 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPS3AP61247 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPS3AP61247 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.12□□□□□ -0.15
RPS3AP61247 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.12□□□□□ -0.15
RPS3AP61247 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPS3AP61247 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.12□□□□□ -0.15
RPS3AP61247 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RPS3AP61247 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.12□□□□□ -0.15
RPS3AP61247 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RPS3AP61247 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPS3AP61247 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.11□□□□□ -0.15
RPS3AP61247 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RPS3AP61247 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.11□□□□□ -0.15
RPS3AP61247 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RPS3AP61247 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPS3AP61247 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RPS3AP61247 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPS3AP61247 SLC9A3P3-201ENST00000457608 2229 ntBASIC14.11□□□□□ -0.15
RPS3AP61247 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPS3AP61247 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPS3AP61247 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RPS3AP61247 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RPS3AP61247 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.11□□□□□ -0.15
RPS3AP61247 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPS3AP61247 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.11□□□□□ -0.15
RPS3AP61247 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPS3AP61247 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
RPS3AP61247 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPS3AP61247 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPS3AP61247 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPS3AP61247 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RPS3AP61247 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RPS3AP61247 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.11□□□□□ -0.15
RPS3AP61247 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RPS3AP61247 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.11□□□□□ -0.15
RPS3AP61247 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.11□□□□□ -0.15
RPS3AP61247 AC123567.1-201ENST00000548294 1261 ntBASIC14.11□□□□□ -0.15
RPS3AP61247 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.11□□□□□ -0.15
RPS3AP61247 AC007431.3-201ENST00000623221 587 ntBASIC14.11□□□□□ -0.15
RPS3AP61247 AL591122.2-201ENST00000624125 1853 ntBASIC14.11□□□□□ -0.15
RPS3AP61247 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPS3AP61247 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.11□□□□□ -0.15
RPS3AP61247 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
RPS3AP61247 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
RPS3AP61247 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPS3AP61247 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RPS3AP61247 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.11□□□□□ -0.15
RPS3AP61247 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPS3AP61247 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.11□□□□□ -0.15
RPS3AP61247 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPS3AP61247 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPS3AP61247 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPS3AP61247 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.11□□□□□ -0.15
RPS3AP61247 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RPS3AP61247 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPS3AP61247 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RPS3AP61247 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RPS3AP61247 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RPS3AP61247 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RPS3AP61247 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPS3AP61247 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RPS3AP61247 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RPS3AP61247 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPS3AP61247 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPS3AP61247 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
RPS3AP61247 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
RPS3AP61247 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RPS3AP61247 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.1□□□□□ -0.15
RPS3AP61247 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.1□□□□□ -0.15
RPS3AP61247 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.1□□□□□ -0.15
RPS3AP61247 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RPS3AP61247 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.1□□□□□ -0.15
RPS3AP61247 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPS3AP61247 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPS3AP61247 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPS3AP61247 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPS3AP61247 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPS3AP61247 AC098614.1-201ENST00000368528 745 ntBASIC14.1□□□□□ -0.15
RPS3AP61247 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.1□□□□□ -0.15
RPS3AP61247 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.1□□□□□ -0.15
RPS3AP61247 KRT18P43-201ENST00000469825 1281 ntBASIC14.1□□□□□ -0.15
RPS3AP61247 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RPS3AP61247 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.1□□□□□ -0.15
RPS3AP61247 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms