Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.12□□□□□ -0.31
DEFA3P59666 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DEFA3P59666 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
DEFA3P59666 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
DEFA3P59666 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DEFA3P59666 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
DEFA3P59666 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
DEFA3P59666 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
DEFA3P59666 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
DEFA3P59666 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.12□□□□□ -0.31
DEFA3P59666 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DEFA3P59666 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DEFA3P59666 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DEFA3P59666 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DEFA3P59666 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
DEFA3P59666 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
DEFA3P59666 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
DEFA3P59666 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DEFA3P59666 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DEFA3P59666 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DEFA3P59666 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
DEFA3P59666 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA3P59666 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
DEFA3P59666 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
DEFA3P59666 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.11□□□□□ -0.31
DEFA3P59666 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.11□□□□□ -0.31
DEFA3P59666 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
DEFA3P59666 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA3P59666 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA3P59666 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC13.11□□□□□ -0.31
DEFA3P59666 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA3P59666 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
DEFA3P59666 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
DEFA3P59666 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA3P59666 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC13.11□□□□□ -0.31
DEFA3P59666 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA3P59666 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
DEFA3P59666 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA3P59666 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA3P59666 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA3P59666 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA3P59666 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.11□□□□□ -0.31
DEFA3P59666 CHCHD2P8-201ENST00000429873 447 ntBASIC13.11□□□□□ -0.31
DEFA3P59666 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.11□□□□□ -0.31
DEFA3P59666 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.11□□□□□ -0.31
DEFA3P59666 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.11□□□□□ -0.31
DEFA3P59666 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.11□□□□□ -0.31
DEFA3P59666 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA3P59666 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC13.11□□□□□ -0.31
DEFA3P59666 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
DEFA3P59666 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA3P59666 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.11□□□□□ -0.31
DEFA3P59666 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.11□□□□□ -0.31
DEFA3P59666 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA3P59666 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
DEFA3P59666 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.11□□□□□ -0.31
DEFA3P59666 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA3P59666 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
DEFA3P59666 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA3P59666 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.11□□□□□ -0.31
DEFA3P59666 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.11□□□□□ -0.31
DEFA3P59666 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA3P59666 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
DEFA3P59666 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC13.11□□□□□ -0.31
DEFA3P59666 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA3P59666 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA3P59666 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
DEFA3P59666 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.11□□□□□ -0.31
DEFA3P59666 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA3P59666 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA3P59666 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
DEFA3P59666 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA3P59666 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC13.1□□□□□ -0.31
DEFA3P59666 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA3P59666 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA3P59666 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA3P59666 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA3P59666 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.1□□□□□ -0.31
DEFA3P59666 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA3P59666 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13.1□□□□□ -0.31
DEFA3P59666 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
DEFA3P59666 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
DEFA3P59666 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
DEFA3P59666 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA3P59666 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA3P59666 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA3P59666 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA3P59666 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA3P59666 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA3P59666 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC13.1□□□□□ -0.31
DEFA3P59666 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.1□□□□□ -0.31
DEFA3P59666 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA3P59666 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA3P59666 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA3P59666 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA3P59666 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA3P59666 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA3P59666 AC005521.1-201ENST00000393351 872 ntBASIC13.1□□□□□ -0.31
DEFA3P59666 TSPY5P-201ENST00000426936 936 ntBASIC13.1□□□□□ -0.31
DEFA3P59666 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms