Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC022144.1-201ENST00000602255 1580 ntBASIC13.98□□□□□ -0.17
CDH12P55289 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH12P55289 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH12P55289 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH12P55289 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH12P55289 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.98□□□□□ -0.17
CDH12P55289 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.98□□□□□ -0.17
CDH12P55289 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH12P55289 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.98□□□□□ -0.17
CDH12P55289 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.98□□□□□ -0.17
CDH12P55289 AC004890.2-204ENST00000481968 304 ntBASIC13.98□□□□□ -0.17
CDH12P55289 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.98□□□□□ -0.17
CDH12P55289 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.98□□□□□ -0.17
CDH12P55289 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.98□□□□□ -0.17
CDH12P55289 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.98□□□□□ -0.17
CDH12P55289 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH12P55289 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.98□□□□□ -0.17
CDH12P55289 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH12P55289 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH12P55289 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH12P55289 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.98□□□□□ -0.17
CDH12P55289 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.98□□□□□ -0.17
CDH12P55289 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CDH12P55289 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CDH12P55289 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CDH12P55289 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH12P55289 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH12P55289 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH12P55289 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH12P55289 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.98□□□□□ -0.17
CDH12P55289 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH12P55289 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH12P55289 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH12P55289 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH12P55289 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH12P55289 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH12P55289 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CDH12P55289 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH12P55289 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH12P55289 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.97□□□□□ -0.17
CDH12P55289 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH12P55289 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.97□□□□□ -0.17
CDH12P55289 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH12P55289 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.97□□□□□ -0.17
CDH12P55289 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDH12P55289 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDH12P55289 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CDH12P55289 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH12P55289 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.97□□□□□ -0.17
CDH12P55289 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.97□□□□□ -0.17
CDH12P55289 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH12P55289 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH12P55289 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH12P55289 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH12P55289 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH12P55289 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.97□□□□□ -0.17
CDH12P55289 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.97□□□□□ -0.17
CDH12P55289 GAPDHP40-201ENST00000505218 1006 ntBASIC13.97□□□□□ -0.17
CDH12P55289 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.97□□□□□ -0.17
CDH12P55289 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH12P55289 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.97□□□□□ -0.17
CDH12P55289 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.97□□□□□ -0.17
CDH12P55289 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.97□□□□□ -0.17
CDH12P55289 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CDH12P55289 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CDH12P55289 AC093512.1-201ENST00000617969 520 ntBASIC13.97□□□□□ -0.17
CDH12P55289 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH12P55289 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.97□□□□□ -0.17
CDH12P55289 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDH12P55289 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.97□□□□□ -0.17
CDH12P55289 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH12P55289 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH12P55289 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH12P55289 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH12P55289 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH12P55289 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDH12P55289 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH12P55289 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.97□□□□□ -0.17
CDH12P55289 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH12P55289 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH12P55289 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.97□□□□□ -0.17
CDH12P55289 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH12P55289 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
CDH12P55289 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH12P55289 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.97□□□□□ -0.17
CDH12P55289 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH12P55289 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDH12P55289 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CDH12P55289 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
CDH12P55289 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDH12P55289 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH12P55289 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH12P55289 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.97□□□□□ -0.17
CDH12P55289 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CDH12P55289 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDH12P55289 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDH12P55289 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDH12P55289 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDH12P55289 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.96□□□□□ -0.17
CDH12P55289 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms