Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 COL11A1-202ENST00000358392 7327 ntAPPRIS ALT1 TSL 5 BASIC9.76□□□□□ -0.85
PCP4P48539 ARF1-201ENST00000272102 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PCP4P48539 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC9.76□□□□□ -0.85
PCP4P48539 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PCP4P48539 TGS1-201ENST00000260129 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PCP4P48539 TKTL1-201ENST00000369912 2566 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
PCP4P48539 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
PCP4P48539 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC9.76□□□□□ -0.85
PCP4P48539 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC9.76□□□□□ -0.85
PCP4P48539 MPP2-221ENST00000625880 4668 ntTSL 5 BASIC9.76□□□□□ -0.85
PCP4P48539 PFKFB3-205ENST00000379789 4157 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
PCP4P48539 TNFSF13B-202ENST00000430559 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
PCP4P48539 SASH1-204ENST00000622663 5075 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
PCP4P48539 SLC25A36-208ENST00000507429 3537 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
PCP4P48539 KIFAP3-206ENST00000538366 3159 ntTSL 2 BASIC9.76□□□□□ -0.85
PCP4P48539 RNF13-203ENST00000392894 2843 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PCP4P48539 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
PCP4P48539 SLIT2-201ENST00000273739 5132 ntTSL 5 BASIC9.76□□□□□ -0.85
PCP4P48539 ABCA8-201ENST00000269080 5677 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
PCP4P48539 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC9.76□□□□□ -0.85
PCP4P48539 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PCP4P48539 LIN54-202ENST00000442461 4254 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
PCP4P48539 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC9.76□□□□□ -0.85
PCP4P48539 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
PCP4P48539 PRKAR1A-217ENST00000589228 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PCP4P48539 LINC02210-CRHR1-202ENST00000634540 2695 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
PCP4P48539 LAMA4-219ENST00000522006 6438 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
PCP4P48539 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC9.76□□□□□ -0.85
PCP4P48539 PKNOX1-201ENST00000291547 5003 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PCP4P48539 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC9.76□□□□□ -0.85
PCP4P48539 GOLGA3-207ENST00000545875 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
PCP4P48539 BCL11A-202ENST00000356842 3959 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
PCP4P48539 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PCP4P48539 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PCP4P48539 NME2-201ENST00000393183 568 ntTSL 2 BASIC9.76□□□□□ -0.85
PCP4P48539 PMS2P2-201ENST00000425039 1128 ntBASIC9.76□□□□□ -0.85
PCP4P48539 AC245052.3-201ENST00000450182 901 ntBASIC9.76□□□□□ -0.85
PCP4P48539 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC9.76□□□□□ -0.85
PCP4P48539 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC9.76□□□□□ -0.85
PCP4P48539 AC011495.2-201ENST00000600665 360 ntTSL 5 BASIC9.76□□□□□ -0.85
PCP4P48539 HCG18-241ENST00000602290 821 ntTSL 2 BASIC9.76□□□□□ -0.85
PCP4P48539 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC9.76□□□□□ -0.85
PCP4P48539 APOBEC3B-203ENST00000402182 1844 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
PCP4P48539 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC9.76□□□□□ -0.85
PCP4P48539 ZSWIM5P2-201ENST00000420212 2038 ntBASIC9.76□□□□□ -0.85
PCP4P48539 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
PCP4P48539 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC9.76□□□□□ -0.85
PCP4P48539 ASAH1-202ENST00000314146 1690 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
PCP4P48539 AC092117.2-201ENST00000623937 1659 ntBASIC9.76□□□□□ -0.85
PCP4P48539 CCDC129-201ENST00000319386 4544 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
PCP4P48539 TCF19-201ENST00000376255 3039 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PCP4P48539 UNC45B-201ENST00000268876 5679 ntAPPRIS P3 TSL 5 BASIC9.76□□□□□ -0.85
PCP4P48539 AC022898.2-201ENST00000616822 1312 ntBASIC9.76□□□□□ -0.85
PCP4P48539 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC9.76□□□□□ -0.85
PCP4P48539 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC9.76□□□□□ -0.85
PCP4P48539 DDR1-224ENST00000376567 3832 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
PCP4P48539 PLEK-201ENST00000234313 2869 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PCP4P48539 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
PCP4P48539 ZNF596-203ENST00000398612 2863 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
PCP4P48539 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC9.76□□□□□ -0.85
PCP4P48539 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC9.76□□□□□ -0.85
PCP4P48539 AL160006.1-201ENST00000554749 4216 ntBASIC9.76□□□□□ -0.85
PCP4P48539 XRCC6-206ENST00000428575 2148 ntTSL 2 BASIC9.76□□□□□ -0.85
PCP4P48539 NMT2-202ENST00000378165 2907 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PCP4P48539 PPP1R26-AS1-202ENST00000603624 2919 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
PCP4P48539 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC9.75□□□□□ -0.85
PCP4P48539 C10orf76-202ENST00000370033 4119 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
PCP4P48539 LARGE1-202ENST00000397394 4138 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
PCP4P48539 SRC-203ENST00000373567 4321 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PCP4P48539 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PCP4P48539 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
PCP4P48539 TRPC7-206ENST00000513104 2987 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
PCP4P48539 FCHO1-218ENST00000596951 2979 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
PCP4P48539 SLC12A3-201ENST00000262502 4208 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
PCP4P48539 SP1-201ENST00000327443 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PCP4P48539 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
PCP4P48539 RAB3GAP2-202ENST00000358951 7257 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PCP4P48539 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PCP4P48539 GBA-204ENST00000428024 1817 ntTSL 2 BASIC9.75□□□□□ -0.85
PCP4P48539 RMND5B-210ENST00000515098 4066 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
PCP4P48539 STK24-208ENST00000539966 9361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
PCP4P48539 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PCP4P48539 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PCP4P48539 CATSPERG-202ENST00000409235 3746 ntAPPRIS P3 TSL 5 BASIC9.75□□□□□ -0.85
PCP4P48539 RPS3-217ENST00000531188 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PCP4P48539 ZNF473-205ENST00000595661 4828 ntAPPRIS P3 TSL 5 BASIC9.75□□□□□ -0.85
PCP4P48539 AL928654.5-201ENST00000624831 2501 ntBASIC9.75□□□□□ -0.85
PCP4P48539 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PCP4P48539 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
PCP4P48539 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC9.75□□□□□ -0.85
PCP4P48539 ZNF319-201ENST00000299237 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PCP4P48539 CDCA8-201ENST00000327331 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PCP4P48539 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PCP4P48539 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC9.75□□□□□ -0.85
PCP4P48539 RPS2-209ENST00000529806 993 ntTSL 3 BASIC9.75□□□□□ -0.85
PCP4P48539 AL139327.4-201ENST00000612362 153 ntBASIC9.75□□□□□ -0.85
PCP4P48539 PRRX1-201ENST00000239461 4284 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PCP4P48539 POLDIP3-201ENST00000252115 3441 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PCP4P48539 AC093390.1-201ENST00000426976 3403 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
PCP4P48539 DAB2-217ENST00000545653 4537 ntTSL 5 BASIC9.75□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms