RNA–Protein interactions for RNA: ENST00000538366.5

KIFAP3-206, Transcript of kinesin associated protein 3, humanhuman

TSL 2 BASIC

Gene KIFAP3, Length 3,159 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFAP3-206ENST00000538366 NISCHQ9Y2I1 1504 aa21.51■■□□□ 1.03
KIFAP3-206ENST00000538366 SHROOM4Q9ULL8 1493 aa19.21■□□□□ 0.67
KIFAP3-206ENST00000538366 HRCP23327 699 aa19.16■□□□□ 0.66
KIFAP3-206ENST00000538366 SUPT5HO00267 1087 aaKnown RBP19.13■□□□□ 0.65
KIFAP3-206ENST00000538366 PCGF6Q9BYE7 350 aa18.89■□□□□ 0.61
KIFAP3-206ENST00000538366 DCAF8L2P0C7V8 631 aa18.86■□□□□ 0.61
KIFAP3-206ENST00000538366 PPARGC1BQ86YN6 1023 aaKnown RBP18.86■□□□□ 0.61
KIFAP3-206ENST00000538366 MYO15BQ96JP2 1530 aa18.78■□□□□ 0.6
KIFAP3-206ENST00000538366 CHIC1Q5VXU3 224 aa18.72■□□□□ 0.59
KIFAP3-206ENST00000538366 LOC105371045A0A1W2PR82 267 aa18.36■□□□□ 0.53
KIFAP3-206ENST00000538366 DCAF1Q9Y4B6 1507 aa18.28■□□□□ 0.52
KIFAP3-206ENST00000538366 PELP1Q8IZL8 1130 aaKnown RBP18.28■□□□□ 0.52
KIFAP3-206ENST00000538366 ZCCHC6Q5VYS8 1495 aaKnown RBP18.27■□□□□ 0.52
KIFAP3-206ENST00000538366 TRIM26Q12899 539 aaPredicted RBP18.22■□□□□ 0.51
KIFAP3-206ENST00000538366 SCAF1Q9H7N4 1312 aaKnown RBP18.11■□□□□ 0.49
KIFAP3-206ENST00000538366 ZEB1P37275 1124 aaPredicted RBP18■□□□□ 0.47
KIFAP3-206ENST00000538366 CCDC180Q9P1Z9 1646 aa17.99■□□□□ 0.47
KIFAP3-206ENST00000538366 FAM9AQ8IZU1 332 aaPredicted RBP17.72■□□□□ 0.43
KIFAP3-206ENST00000538366 EHMT2Q96KQ7 1210 aa17.71■□□□□ 0.42
KIFAP3-206ENST00000538366 ACIN1Q9UKV3 1341 aaKnown RBP17.67■□□□□ 0.42
KIFAP3-206ENST00000538366 NEUROD1Q13562 356 aa17.67■□□□□ 0.42
KIFAP3-206ENST00000538366 TRIM41Q8WV44 630 aa17.65■□□□□ 0.42
KIFAP3-206ENST00000538366 GTF3C3Q9Y5Q9 886 aa17.56■□□□□ 0.4
KIFAP3-206ENST00000538366 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.54■□□□□ 0.4
KIFAP3-206ENST00000538366 MYT1Q01538 1121 aa17.5■□□□□ 0.39
KIFAP3-206ENST00000538366 CCER1Q8TC90 406 aaPredicted RBP17.48■□□□□ 0.39
KIFAP3-206ENST00000538366 CENPBP07199 599 aaPredicted RBP17.45■□□□□ 0.38
KIFAP3-206ENST00000538366 DIEXFQ68CQ4 756 aaKnown RBP17.44■□□□□ 0.38
KIFAP3-206ENST00000538366 RSF1Q96T23 1441 aaPredicted RBP17.36■□□□□ 0.37
KIFAP3-206ENST00000538366 ABCC9O60706 1549 aa17.32■□□□□ 0.36
KIFAP3-206ENST00000538366 TTBK1Q5TCY1 1321 aaPredicted RBP17.26■□□□□ 0.35
KIFAP3-206ENST00000538366 RB1CC1Q8TDY2 1594 aa17.24■□□□□ 0.35
KIFAP3-206ENST00000538366 YTHDC1Q96MU7 727 aaKnown RBP17.23■□□□□ 0.35
KIFAP3-206ENST00000538366 ZNF316A6NFI3 1004 aaPredicted RBP17.1■□□□□ 0.33
KIFAP3-206ENST00000538366 SCRIBQ14160 1630 aa17.09■□□□□ 0.33
KIFAP3-206ENST00000538366 MIER1Q8N108 512 aa17.02■□□□□ 0.32
KIFAP3-206ENST00000538366 CECR2Q9BXF3 1484 aa16.92■□□□□ 0.3
KIFAP3-206ENST00000538366 WRNQ14191 1432 aaPredicted RBP eCLIP16.86■□□□□ 0.29
KIFAP3-206ENST00000538366 MROH2BQ7Z745 1585 aa16.85■□□□□ 0.29
KIFAP3-206ENST00000538366 CEP162Q5TB80 1403 aa16.85■□□□□ 0.29
KIFAP3-206ENST00000538366 HNRNPUL2Q1KMD3 747 aaKnown RBP16.82■□□□□ 0.28
KIFAP3-206ENST00000538366 PABPN1Q86U42 306 aaKnown RBP eCLIP16.82■□□□□ 0.28
KIFAP3-206ENST00000538366 UBTFP17480 764 aaKnown RBP16.78■□□□□ 0.28
KIFAP3-206ENST00000538366 WIZO95785 1651 aa16.76■□□□□ 0.27
KIFAP3-206ENST00000538366 CCDC88BA6NC98 1476 aa16.74■□□□□ 0.27
KIFAP3-206ENST00000538366 TNIKQ9UKE5 1360 aa16.72■□□□□ 0.27
KIFAP3-206ENST00000538366 SUPT16HQ9Y5B9 1047 aaKnown RBP16.71■□□□□ 0.26
KIFAP3-206ENST00000538366 SOGA1O94964 1423 aa16.7■□□□□ 0.26
KIFAP3-206ENST00000538366 ABCC8Q09428 1581 aa16.7■□□□□ 0.26
KIFAP3-206ENST00000538366 CSRNP3Q8WYN3 585 aa16.67■□□□□ 0.26
KIFAP3-206ENST00000538366 RANGAP1P46060 587 aaPredicted RBP16.65■□□□□ 0.26
KIFAP3-206ENST00000538366 EIF4G1Q04637 1599 aaKnown RBP16.63■□□□□ 0.25
KIFAP3-206ENST00000538366 TSHZ2Q9NRE2 1034 aa16.62■□□□□ 0.25
KIFAP3-206ENST00000538366 RUSC2Q8N2Y8 1516 aa16.6■□□□□ 0.25
KIFAP3-206ENST00000538366 ANP32EQ9BTT0 268 aa16.59■□□□□ 0.25
KIFAP3-206ENST00000538366 BAZ1AQ9NRL2 1556 aaPredicted RBP16.57■□□□□ 0.24
KIFAP3-206ENST00000538366 CLSPNQ9HAW4 1339 aa16.55■□□□□ 0.24
KIFAP3-206ENST00000538366 BCL11AQ9H165 835 aa16.52■□□□□ 0.23
KIFAP3-206ENST00000538366 GOLGA3Q08378 1498 aa16.5■□□□□ 0.23
KIFAP3-206ENST00000538366 APLP2Q06481 763 aa16.49■□□□□ 0.23
KIFAP3-206ENST00000538366 EEA1Q15075 1411 aa16.48■□□□□ 0.23
KIFAP3-206ENST00000538366 BCANQ96GW7 911 aa16.46■□□□□ 0.22
KIFAP3-206ENST00000538366 CLIP1P30622 1438 aa16.42■□□□□ 0.22
KIFAP3-206ENST00000538366 KCNH8Q96L42 1107 aa16.4■□□□□ 0.22
KIFAP3-206ENST00000538366 NACADO15069 1562 aa16.4■□□□□ 0.22
KIFAP3-206ENST00000538366 TOP2AP11388 1531 aaKnown RBP16.4■□□□□ 0.22
KIFAP3-206ENST00000538366 DHX57Q6P158 1386 aaKnown RBP16.37■□□□□ 0.21
KIFAP3-206ENST00000538366 SMARCA2P51531 1590 aa16.37■□□□□ 0.21
KIFAP3-206ENST00000538366 VPS8Q8N3P4 1428 aa16.36■□□□□ 0.21
KIFAP3-206ENST00000538366 FKBP8Q14318 412 aa16.32■□□□□ 0.2
KIFAP3-206ENST00000538366 CEP164Q9UPV0 1460 aa16.32■□□□□ 0.2
KIFAP3-206ENST00000538366 RBM19Q9Y4C8 960 aaKnown RBP16.24■□□□□ 0.19
KIFAP3-206ENST00000538366 SMARCA4P51532 1647 aa16.22■□□□□ 0.19
KIFAP3-206ENST00000538366 RAPGEF2Q9Y4G8 1499 aa16.22■□□□□ 0.19
KIFAP3-206ENST00000538366 KANK4Q5T7N3 995 aaPredicted RBP16.22■□□□□ 0.19
KIFAP3-206ENST00000538366 ITGAEP38570 1179 aa16.2■□□□□ 0.18
KIFAP3-206ENST00000538366 KIF21BO75037 1637 aa16.2■□□□□ 0.18
KIFAP3-206ENST00000538366 DDX10Q13206 875 aaKnown RBP16.18■□□□□ 0.18
KIFAP3-206ENST00000538366 NEFLP07196 543 aa16.16■□□□□ 0.18
KIFAP3-206ENST00000538366 SYNJ1O43426 1573 aa16.14■□□□□ 0.17
KIFAP3-206ENST00000538366 BAZ1BQ9UIG0 1483 aaKnown RBP16.13■□□□□ 0.17
KIFAP3-206ENST00000538366 TRIM52Q96A61 297 aa16.13■□□□□ 0.17
KIFAP3-206ENST00000538366 MSH5O43196 834 aa16.09■□□□□ 0.17
KIFAP3-206ENST00000538366 HIRIP3Q9BW71 556 aaPredicted RBP16.06■□□□□ 0.16
KIFAP3-206ENST00000538366 RRBP1Q9P2E9 1410 aaKnown RBP16.03■□□□□ 0.16
KIFAP3-206ENST00000538366 CCNB3Q8WWL7 1395 aa16.03■□□□□ 0.16
KIFAP3-206ENST00000538366 SIN3AQ96ST3 1273 aa16.02■□□□□ 0.16
KIFAP3-206ENST00000538366 ARAP1Q96P48 1450 aa16.02■□□□□ 0.16
KIFAP3-206ENST00000538366 RAB3GAP2Q9H2M9 1393 aa16■□□□□ 0.15
KIFAP3-206ENST00000538366 PPP1R15AO75807 674 aaPredicted RBP16■□□□□ 0.15
KIFAP3-206ENST00000538366 CUX2O14529 1486 aa15.97■□□□□ 0.15
KIFAP3-206ENST00000538366 ANP32CO43423 234 aa15.97■□□□□ 0.15
KIFAP3-206ENST00000538366 ERICH6Q7L0X2 663 aa15.96■□□□□ 0.15
KIFAP3-206ENST00000538366 IRX6P78412 446 aaPredicted RBP15.95■□□□□ 0.14
KIFAP3-206ENST00000538366 MAPKBP1O60336 1514 aa15.95■□□□□ 0.14
KIFAP3-206ENST00000538366 WDR97A6NE52 1622 aa15.94■□□□□ 0.14
KIFAP3-206ENST00000538366 CCER2I3L3R5 266 aa15.93■□□□□ 0.14
KIFAP3-206ENST00000538366 ATP1B4Q9UN42 357 aaPredicted RBP15.92■□□□□ 0.14
KIFAP3-206ENST00000538366 CDK11AQ9UQ88 783 aaPredicted RBP15.9■□□□□ 0.14
KIFAP3-206ENST00000538366 FANCIQ9NVI1 1328 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms