RNA–Protein interactions for RNA: ENST00000430559.5

TNFSF13B-202, Transcript of TNF superfamily member 13b, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,614 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-202ENST00000430559 NISCHQ9Y2I1 1504 aa26.55■■□□□ 1.84
TNFSF13B-202ENST00000430559 SHROOM4Q9ULL8 1493 aa22.65■■□□□ 1.22
TNFSF13B-202ENST00000430559 CCDC180Q9P1Z9 1646 aa22.59■■□□□ 1.21
TNFSF13B-202ENST00000430559 ZCCHC6Q5VYS8 1495 aaKnown RBP22.42■■□□□ 1.18
TNFSF13B-202ENST00000430559 DCAF8L2P0C7V8 631 aa22.15■■□□□ 1.14
TNFSF13B-202ENST00000430559 SUPT5HO00267 1087 aaKnown RBP22.06■■□□□ 1.12
TNFSF13B-202ENST00000430559 DCAF1Q9Y4B6 1507 aa21.68■■□□□ 1.06
TNFSF13B-202ENST00000430559 CHIC1Q5VXU3 224 aa21.32■■□□□ 1
TNFSF13B-202ENST00000430559 MYO15BQ96JP2 1530 aa21.3■■□□□ 1
TNFSF13B-202ENST00000430559 SCRIBQ14160 1630 aa21.29■■□□□ 1
TNFSF13B-202ENST00000430559 ABCC9O60706 1549 aa21.25■□□□□ 0.99
TNFSF13B-202ENST00000430559 RSF1Q96T23 1441 aaPredicted RBP20.97■□□□□ 0.95
TNFSF13B-202ENST00000430559 NACADO15069 1562 aa20.92■□□□□ 0.94
TNFSF13B-202ENST00000430559 CECR2Q9BXF3 1484 aa20.83■□□□□ 0.93
TNFSF13B-202ENST00000430559 RB1CC1Q8TDY2 1594 aa20.78■□□□□ 0.92
TNFSF13B-202ENST00000430559 LOC105371045A0A1W2PR82 267 aa20.76■□□□□ 0.91
TNFSF13B-202ENST00000430559 MROH2BQ7Z745 1585 aa20.71■□□□□ 0.91
TNFSF13B-202ENST00000430559 WIZO95785 1651 aa20.6■□□□□ 0.89
TNFSF13B-202ENST00000430559 UNC13AQ9UPW8 1703 aa20.5■□□□□ 0.87
TNFSF13B-202ENST00000430559 PCGF6Q9BYE7 350 aa20.47■□□□□ 0.87
TNFSF13B-202ENST00000430559 TRIM41Q8WV44 630 aa20.46■□□□□ 0.87
TNFSF13B-202ENST00000430559 FAM9AQ8IZU1 332 aaPredicted RBP20.42■□□□□ 0.86
TNFSF13B-202ENST00000430559 BAZ1AQ9NRL2 1556 aaPredicted RBP20.36■□□□□ 0.85
TNFSF13B-202ENST00000430559 EHMT2Q96KQ7 1210 aa20.34■□□□□ 0.85
TNFSF13B-202ENST00000430559 PABPN1Q86U42 306 aaKnown RBP eCLIP20.32■□□□□ 0.84
TNFSF13B-202ENST00000430559 SMARCA4P51532 1647 aa20.28■□□□□ 0.84
TNFSF13B-202ENST00000430559 HRCP23327 699 aa20.26■□□□□ 0.83
TNFSF13B-202ENST00000430559 BICRAQ9NZM4 1560 aa20.22■□□□□ 0.83
TNFSF13B-202ENST00000430559 EIF4G1Q04637 1599 aaKnown RBP20.21■□□□□ 0.83
TNFSF13B-202ENST00000430559 TOP2AP11388 1531 aaKnown RBP20.17■□□□□ 0.82
TNFSF13B-202ENST00000430559 CCDC88BA6NC98 1476 aa20.14■□□□□ 0.81
TNFSF13B-202ENST00000430559 SMARCA2P51531 1590 aa20.11■□□□□ 0.81
TNFSF13B-202ENST00000430559 ABCC8Q09428 1581 aa20.1■□□□□ 0.81
TNFSF13B-202ENST00000430559 PPARGC1BQ86YN6 1023 aaKnown RBP20.06■□□□□ 0.8
TNFSF13B-202ENST00000430559 TRIM26Q12899 539 aaPredicted RBP20.01■□□□□ 0.79
TNFSF13B-202ENST00000430559 AEBP2Q6ZN18 517 aaPredicted RBP19.96■□□□□ 0.79
TNFSF13B-202ENST00000430559 SOGA1O94964 1423 aa19.84■□□□□ 0.77
TNFSF13B-202ENST00000430559 PEG3Q9GZU2 1588 aa19.84■□□□□ 0.77
TNFSF13B-202ENST00000430559 RUSC2Q8N2Y8 1516 aa19.81■□□□□ 0.76
TNFSF13B-202ENST00000430559 ATAD2BQ9ULI0 1458 aa19.8■□□□□ 0.76
TNFSF13B-202ENST00000430559 BAZ1BQ9UIG0 1483 aaKnown RBP19.71■□□□□ 0.75
TNFSF13B-202ENST00000430559 WRNQ14191 1432 aaPredicted RBP eCLIP19.67■□□□□ 0.74
TNFSF13B-202ENST00000430559 SYNJ1O43426 1573 aa19.66■□□□□ 0.74
TNFSF13B-202ENST00000430559 TTBK1Q5TCY1 1321 aaPredicted RBP19.61■□□□□ 0.73
TNFSF13B-202ENST00000430559 CSRNP3Q8WYN3 585 aa19.61■□□□□ 0.73
TNFSF13B-202ENST00000430559 CEP162Q5TB80 1403 aa19.59■□□□□ 0.73
TNFSF13B-202ENST00000430559 UBTFP17480 764 aaKnown RBP19.54■□□□□ 0.72
TNFSF13B-202ENST00000430559 TNIKQ9UKE5 1360 aa19.51■□□□□ 0.71
TNFSF13B-202ENST00000430559 EEA1Q15075 1411 aa19.49■□□□□ 0.71
TNFSF13B-202ENST00000430559 GOLGA3Q08378 1498 aa19.44■□□□□ 0.7
TNFSF13B-202ENST00000430559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.4■□□□□ 0.7
TNFSF13B-202ENST00000430559 NCAPD3P42695 1498 aa19.4■□□□□ 0.7
TNFSF13B-202ENST00000430559 HMGXB3Q12766 1538 aa19.36■□□□□ 0.69
TNFSF13B-202ENST00000430559 TOP2BQ02880 1626 aa19.35■□□□□ 0.69
TNFSF13B-202ENST00000430559 RAPGEF2Q9Y4G8 1499 aa19.35■□□□□ 0.69
TNFSF13B-202ENST00000430559 CEP164Q9UPV0 1460 aa19.34■□□□□ 0.69
TNFSF13B-202ENST00000430559 ZEB1P37275 1124 aaPredicted RBP19.34■□□□□ 0.69
TNFSF13B-202ENST00000430559 RANGAP1P46060 587 aaPredicted RBP19.34■□□□□ 0.69
TNFSF13B-202ENST00000430559 KIF21BO75037 1637 aa19.33■□□□□ 0.68
TNFSF13B-202ENST00000430559 BIVM-ERCC5R4GMW8 1640 aa19.28■□□□□ 0.68
TNFSF13B-202ENST00000430559 CUX1P39880 1505 aa19.27■□□□□ 0.68
TNFSF13B-202ENST00000430559 CLIP1P30622 1438 aa19.24■□□□□ 0.67
TNFSF13B-202ENST00000430559 CCER1Q8TC90 406 aaPredicted RBP19.22■□□□□ 0.67
TNFSF13B-202ENST00000430559 CFTRP13569 1480 aa19.22■□□□□ 0.67
TNFSF13B-202ENST00000430559 VPS8Q8N3P4 1428 aa19.12■□□□□ 0.65
TNFSF13B-202ENST00000430559 PRXQ9BXM0 1461 aa19.12■□□□□ 0.65
TNFSF13B-202ENST00000430559 CC2D2AQ9P2K1 1620 aa19.1■□□□□ 0.65
TNFSF13B-202ENST00000430559 HNRNPUL2Q1KMD3 747 aaKnown RBP19.05■□□□□ 0.64
TNFSF13B-202ENST00000430559 PRDM2Q13029 1718 aa19.03■□□□□ 0.64
TNFSF13B-202ENST00000430559 ERICH3Q5RHP9 1530 aa19.03■□□□□ 0.64
TNFSF13B-202ENST00000430559 CADPSQ9ULU8 1353 aa19.03■□□□□ 0.64
TNFSF13B-202ENST00000430559 KIF27Q86VH2 1401 aa19.03■□□□□ 0.64
TNFSF13B-202ENST00000430559 ARAP1Q96P48 1450 aa19.02■□□□□ 0.63
TNFSF13B-202ENST00000430559 CUX2O14529 1486 aa18.96■□□□□ 0.63
TNFSF13B-202ENST00000430559 FGD5Q6ZNL6 1462 aa18.94■□□□□ 0.62
TNFSF13B-202ENST00000430559 KANK4Q5T7N3 995 aaPredicted RBP18.94■□□□□ 0.62
TNFSF13B-202ENST00000430559 APLP2Q06481 763 aa18.93■□□□□ 0.62
TNFSF13B-202ENST00000430559 NESP48681 1621 aa18.93■□□□□ 0.62
TNFSF13B-202ENST00000430559 IGF1RP08069 1367 aa18.91■□□□□ 0.62
TNFSF13B-202ENST00000430559 DNAJC5BQ9UF47 199 aa18.89■□□□□ 0.61
TNFSF13B-202ENST00000430559 FANCD2Q9BXW9 1451 aa18.88■□□□□ 0.61
TNFSF13B-202ENST00000430559 ARHGAP35Q9NRY4 1499 aa18.88■□□□□ 0.61
TNFSF13B-202ENST00000430559 RAD54L2Q9Y4B4 1467 aa18.83■□□□□ 0.61
TNFSF13B-202ENST00000430559 CARMIL1Q5VZK9 1371 aa18.8■□□□□ 0.6
TNFSF13B-202ENST00000430559 POLA1P09884 1462 aaPredicted RBP18.74■□□□□ 0.59
TNFSF13B-202ENST00000430559 TOPBP1Q92547 1522 aa18.74■□□□□ 0.59
TNFSF13B-202ENST00000430559 DIEXFQ68CQ4 756 aaKnown RBP18.72■□□□□ 0.59
TNFSF13B-202ENST00000430559 DNMBPQ6XZF7 1577 aa18.72■□□□□ 0.59
TNFSF13B-202ENST00000430559 P3H3Q8IVL6 736 aa18.72■□□□□ 0.59
TNFSF13B-202ENST00000430559 URB2Q14146 1524 aaKnown RBP18.66■□□□□ 0.58
TNFSF13B-202ENST00000430559 ABCA10Q8WWZ4 1543 aa18.66■□□□□ 0.58
TNFSF13B-202ENST00000430559 ITGAEP38570 1179 aa18.65■□□□□ 0.58
TNFSF13B-202ENST00000430559 RRBP1Q9P2E9 1410 aaKnown RBP18.64■□□□□ 0.57
TNFSF13B-202ENST00000430559 ZNF316A6NFI3 1004 aaPredicted RBP18.62■□□□□ 0.57
TNFSF13B-202ENST00000430559 SCAF1Q9H7N4 1312 aaKnown RBP18.61■□□□□ 0.57
TNFSF13B-202ENST00000430559 DHX57Q6P158 1386 aaKnown RBP18.61■□□□□ 0.57
TNFSF13B-202ENST00000430559 FHOD3Q2V2M9 1422 aa18.6■□□□□ 0.57
TNFSF13B-202ENST00000430559 TIAM1Q13009 1591 aa18.59■□□□□ 0.57
TNFSF13B-202ENST00000430559 TDRD9Q8NDG6 1382 aaKnown RBP18.59■□□□□ 0.57
TNFSF13B-202ENST00000430559 CCNB3Q8WWL7 1395 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms