RNA–Protein interactions for RNA: ENST00000252115.9

POLDIP3-201, Transcript of DNA polymerase delta interacting protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLDIP3, Length 3,441 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLDIP3-201ENST00000252115 NISCHQ9Y2I1 1504 aa21.91■■□□□ 1.1
POLDIP3-201ENST00000252115 SHROOM4Q9ULL8 1493 aa19.46■□□□□ 0.71
POLDIP3-201ENST00000252115 SUPT5HO00267 1087 aaKnown RBP19.28■□□□□ 0.68
POLDIP3-201ENST00000252115 DCAF8L2P0C7V8 631 aa18.97■□□□□ 0.63
POLDIP3-201ENST00000252115 HRCP23327 699 aa18.69■□□□□ 0.58
POLDIP3-201ENST00000252115 CHIC1Q5VXU3 224 aa18.68■□□□□ 0.58
POLDIP3-201ENST00000252115 MYO15BQ96JP2 1530 aa18.66■□□□□ 0.58
POLDIP3-201ENST00000252115 PCGF6Q9BYE7 350 aa18.65■□□□□ 0.58
POLDIP3-201ENST00000252115 ZCCHC6Q5VYS8 1495 aaKnown RBP18.55■□□□□ 0.56
POLDIP3-201ENST00000252115 PPARGC1BQ86YN6 1023 aaKnown RBP18.51■□□□□ 0.55
POLDIP3-201ENST00000252115 LOC105371045A0A1W2PR82 267 aa18.35■□□□□ 0.53
POLDIP3-201ENST00000252115 CCDC180Q9P1Z9 1646 aa18.19■□□□□ 0.5
POLDIP3-201ENST00000252115 DCAF1Q9Y4B6 1507 aa18.03■□□□□ 0.48
POLDIP3-201ENST00000252115 TRIM26Q12899 539 aaPredicted RBP18■□□□□ 0.47
POLDIP3-201ENST00000252115 EHMT2Q96KQ7 1210 aa17.91■□□□□ 0.46
POLDIP3-201ENST00000252115 FAM9AQ8IZU1 332 aaPredicted RBP17.88■□□□□ 0.45
POLDIP3-201ENST00000252115 TRIM41Q8WV44 630 aa17.78■□□□□ 0.44
POLDIP3-201ENST00000252115 ZEB1P37275 1124 aaPredicted RBP17.66■□□□□ 0.42
POLDIP3-201ENST00000252115 ABCC9O60706 1549 aa17.65■□□□□ 0.42
POLDIP3-201ENST00000252115 RSF1Q96T23 1441 aaPredicted RBP17.59■□□□□ 0.41
POLDIP3-201ENST00000252115 SCAF1Q9H7N4 1312 aaKnown RBP17.54■□□□□ 0.4
POLDIP3-201ENST00000252115 SCRIBQ14160 1630 aa17.51■□□□□ 0.39
POLDIP3-201ENST00000252115 RB1CC1Q8TDY2 1594 aa17.45■□□□□ 0.38
POLDIP3-201ENST00000252115 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.42■□□□□ 0.38
POLDIP3-201ENST00000252115 TTBK1Q5TCY1 1321 aaPredicted RBP17.38■□□□□ 0.37
POLDIP3-201ENST00000252115 CCER1Q8TC90 406 aaPredicted RBP17.35■□□□□ 0.37
POLDIP3-201ENST00000252115 PELP1Q8IZL8 1130 aaKnown RBP17.34■□□□□ 0.37
POLDIP3-201ENST00000252115 CECR2Q9BXF3 1484 aa17.27■□□□□ 0.35
POLDIP3-201ENST00000252115 NEUROD1Q13562 356 aa17.22■□□□□ 0.35
POLDIP3-201ENST00000252115 ACIN1Q9UKV3 1341 aaKnown RBP17.18■□□□□ 0.34
POLDIP3-201ENST00000252115 MROH2BQ7Z745 1585 aa17.17■□□□□ 0.34
POLDIP3-201ENST00000252115 DIEXFQ68CQ4 756 aaKnown RBP17.15■□□□□ 0.34
POLDIP3-201ENST00000252115 GTF3C3Q9Y5Q9 886 aa17.11■□□□□ 0.33
POLDIP3-201ENST00000252115 WIZO95785 1651 aa17.08■□□□□ 0.32
POLDIP3-201ENST00000252115 CENPBP07199 599 aaPredicted RBP17.02■□□□□ 0.32
POLDIP3-201ENST00000252115 YTHDC1Q96MU7 727 aaKnown RBP16.98■□□□□ 0.31
POLDIP3-201ENST00000252115 PABPN1Q86U42 306 aaKnown RBP eCLIP16.98■□□□□ 0.31
POLDIP3-201ENST00000252115 UBTFP17480 764 aaKnown RBP16.96■□□□□ 0.31
POLDIP3-201ENST00000252115 ABCC8Q09428 1581 aa16.93■□□□□ 0.3
POLDIP3-201ENST00000252115 NACADO15069 1562 aa16.92■□□□□ 0.3
POLDIP3-201ENST00000252115 CCDC88BA6NC98 1476 aa16.92■□□□□ 0.3
POLDIP3-201ENST00000252115 CEP162Q5TB80 1403 aa16.9■□□□□ 0.3
POLDIP3-201ENST00000252115 SOGA1O94964 1423 aa16.88■□□□□ 0.29
POLDIP3-201ENST00000252115 ZNF316A6NFI3 1004 aaPredicted RBP16.86■□□□□ 0.29
POLDIP3-201ENST00000252115 HNRNPUL2Q1KMD3 747 aaKnown RBP16.86■□□□□ 0.29
POLDIP3-201ENST00000252115 BAZ1AQ9NRL2 1556 aaPredicted RBP16.82■□□□□ 0.28
POLDIP3-201ENST00000252115 CSRNP3Q8WYN3 585 aa16.82■□□□□ 0.28
POLDIP3-201ENST00000252115 RUSC2Q8N2Y8 1516 aa16.79■□□□□ 0.28
POLDIP3-201ENST00000252115 WRNQ14191 1432 aaPredicted RBP eCLIP16.79■□□□□ 0.28
POLDIP3-201ENST00000252115 RANGAP1P46060 587 aaPredicted RBP16.78■□□□□ 0.28
POLDIP3-201ENST00000252115 EIF4G1Q04637 1599 aaKnown RBP16.77■□□□□ 0.28
POLDIP3-201ENST00000252115 MIER1Q8N108 512 aa16.77■□□□□ 0.27
POLDIP3-201ENST00000252115 TNIKQ9UKE5 1360 aa16.76■□□□□ 0.27
POLDIP3-201ENST00000252115 TOP2AP11388 1531 aaKnown RBP16.67■□□□□ 0.26
POLDIP3-201ENST00000252115 SMARCA2P51531 1590 aa16.64■□□□□ 0.25
POLDIP3-201ENST00000252115 UNC13AQ9UPW8 1703 aa16.62■□□□□ 0.25
POLDIP3-201ENST00000252115 APLP2Q06481 763 aa16.6■□□□□ 0.25
POLDIP3-201ENST00000252115 GOLGA3Q08378 1498 aa16.59■□□□□ 0.25
POLDIP3-201ENST00000252115 SMARCA4P51532 1647 aa16.58■□□□□ 0.24
POLDIP3-201ENST00000252115 EEA1Q15075 1411 aa16.56■□□□□ 0.24
POLDIP3-201ENST00000252115 CLIP1P30622 1438 aa16.52■□□□□ 0.24
POLDIP3-201ENST00000252115 MYT1Q01538 1121 aa16.5■□□□□ 0.23
POLDIP3-201ENST00000252115 BICRAQ9NZM4 1560 aa16.46■□□□□ 0.23
POLDIP3-201ENST00000252115 CEP164Q9UPV0 1460 aa16.44■□□□□ 0.22
POLDIP3-201ENST00000252115 VPS8Q8N3P4 1428 aa16.41■□□□□ 0.22
POLDIP3-201ENST00000252115 RAPGEF2Q9Y4G8 1499 aa16.4■□□□□ 0.22
POLDIP3-201ENST00000252115 SYNJ1O43426 1573 aa16.38■□□□□ 0.21
POLDIP3-201ENST00000252115 ITGAEP38570 1179 aa16.35■□□□□ 0.21
POLDIP3-201ENST00000252115 KANK4Q5T7N3 995 aaPredicted RBP16.33■□□□□ 0.2
POLDIP3-201ENST00000252115 SUPT16HQ9Y5B9 1047 aaKnown RBP16.31■□□□□ 0.2
POLDIP3-201ENST00000252115 DHX57Q6P158 1386 aaKnown RBP16.3■□□□□ 0.2
POLDIP3-201ENST00000252115 KIF21BO75037 1637 aa16.29■□□□□ 0.2
POLDIP3-201ENST00000252115 KCNH8Q96L42 1107 aa16.24■□□□□ 0.19
POLDIP3-201ENST00000252115 BAZ1BQ9UIG0 1483 aaKnown RBP16.21■□□□□ 0.19
POLDIP3-201ENST00000252115 BCANQ96GW7 911 aa16.19■□□□□ 0.18
POLDIP3-201ENST00000252115 CLSPNQ9HAW4 1339 aa16.18■□□□□ 0.18
POLDIP3-201ENST00000252115 ATAD2BQ9ULI0 1458 aa16.16■□□□□ 0.18
POLDIP3-201ENST00000252115 TSHZ2Q9NRE2 1034 aa16.14■□□□□ 0.17
POLDIP3-201ENST00000252115 ARAP1Q96P48 1450 aa16.13■□□□□ 0.17
POLDIP3-201ENST00000252115 PEG3Q9GZU2 1588 aa16.09■□□□□ 0.17
POLDIP3-201ENST00000252115 DDX10Q13206 875 aaKnown RBP16.09■□□□□ 0.17
POLDIP3-201ENST00000252115 HIRIP3Q9BW71 556 aaPredicted RBP16.08■□□□□ 0.16
POLDIP3-201ENST00000252115 CCNB3Q8WWL7 1395 aa16.07■□□□□ 0.16
POLDIP3-201ENST00000252115 SIN3AQ96ST3 1273 aa16.05■□□□□ 0.16
POLDIP3-201ENST00000252115 PRXQ9BXM0 1461 aa16.05■□□□□ 0.16
POLDIP3-201ENST00000252115 FKBP8Q14318 412 aa16.04■□□□□ 0.16
POLDIP3-201ENST00000252115 DNAJC5BQ9UF47 199 aa16.04■□□□□ 0.16
POLDIP3-201ENST00000252115 ATP1B4Q9UN42 357 aaPredicted RBP16.04■□□□□ 0.16
POLDIP3-201ENST00000252115 TOP2BQ02880 1626 aa16.04■□□□□ 0.16
POLDIP3-201ENST00000252115 RRBP1Q9P2E9 1410 aaKnown RBP16.03■□□□□ 0.16
POLDIP3-201ENST00000252115 RAB3GAP2Q9H2M9 1393 aa16.02■□□□□ 0.16
POLDIP3-201ENST00000252115 FAM50AQ14320 339 aaKnown RBP16.02■□□□□ 0.15
POLDIP3-201ENST00000252115 P3H3Q8IVL6 736 aa15.98■□□□□ 0.15
POLDIP3-201ENST00000252115 TRIM52Q96A61 297 aa15.97■□□□□ 0.15
POLDIP3-201ENST00000252115 KIF27Q86VH2 1401 aa15.97■□□□□ 0.15
POLDIP3-201ENST00000252115 ERICH3Q5RHP9 1530 aa15.97■□□□□ 0.15
POLDIP3-201ENST00000252115 ANP32EQ9BTT0 268 aa15.96■□□□□ 0.15
POLDIP3-201ENST00000252115 ARHGAP35Q9NRY4 1499 aa15.95■□□□□ 0.14
POLDIP3-201ENST00000252115 CUX1P39880 1505 aa15.92■□□□□ 0.14
POLDIP3-201ENST00000252115 CC2D2AQ9P2K1 1620 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms