Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CLUP10909 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLUP10909 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CLUP10909 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.54□□□□□ -0.24
CLUP10909 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.54□□□□□ -0.24
CLUP10909 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLUP10909 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
CLUP10909 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.53□□□□□ -0.24
CLUP10909 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLUP10909 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.53□□□□□ -0.24
CLUP10909 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLUP10909 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLUP10909 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CLUP10909 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLUP10909 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.53□□□□□ -0.24
CLUP10909 AC055811.4-201ENST00000624039 1754 ntBASIC13.53□□□□□ -0.24
CLUP10909 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CLUP10909 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLUP10909 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
CLUP10909 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLUP10909 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CLUP10909 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CLUP10909 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CLUP10909 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLUP10909 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.53□□□□□ -0.24
CLUP10909 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLUP10909 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLUP10909 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLUP10909 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLUP10909 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.53□□□□□ -0.24
CLUP10909 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.53□□□□□ -0.24
CLUP10909 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLUP10909 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.53□□□□□ -0.24
CLUP10909 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.53□□□□□ -0.24
CLUP10909 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.53□□□□□ -0.24
CLUP10909 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.53□□□□□ -0.24
CLUP10909 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.53□□□□□ -0.24
CLUP10909 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLUP10909 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.53□□□□□ -0.24
CLUP10909 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLUP10909 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.53□□□□□ -0.24
CLUP10909 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
CLUP10909 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.53□□□□□ -0.24
CLUP10909 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CLUP10909 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLUP10909 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLUP10909 AC093525.8-201ENST00000624099 1342 ntBASIC13.53□□□□□ -0.24
CLUP10909 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.53□□□□□ -0.24
CLUP10909 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLUP10909 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLUP10909 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLUP10909 DRD5P1-201ENST00000456605 1438 ntBASIC13.53□□□□□ -0.24
CLUP10909 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.53□□□□□ -0.24
CLUP10909 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CLUP10909 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CLUP10909 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLUP10909 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLUP10909 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLUP10909 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLUP10909 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.52□□□□□ -0.24
CLUP10909 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
CLUP10909 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
CLUP10909 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLUP10909 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLUP10909 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
CLUP10909 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLUP10909 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLUP10909 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLUP10909 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLUP10909 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CLUP10909 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLUP10909 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.52□□□□□ -0.25
CLUP10909 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLUP10909 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLUP10909 MIR943-201ENST00000401286 94 ntBASIC13.52□□□□□ -0.25
CLUP10909 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.52□□□□□ -0.25
CLUP10909 AC009477.1-201ENST00000452936 217 ntBASIC13.52□□□□□ -0.25
CLUP10909 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.52□□□□□ -0.25
CLUP10909 AC022447.6-201ENST00000515522 438 ntBASIC13.52□□□□□ -0.25
CLUP10909 IGHV3-42-201ENST00000520410 361 ntBASIC13.52□□□□□ -0.25
CLUP10909 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.52□□□□□ -0.25
CLUP10909 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.52□□□□□ -0.25
CLUP10909 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.52□□□□□ -0.25
CLUP10909 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.52□□□□□ -0.25
CLUP10909 AC107373.2-201ENST00000607735 490 ntBASIC13.52□□□□□ -0.25
CLUP10909 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.52□□□□□ -0.25
CLUP10909 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CLUP10909 AC004840.1-201ENST00000636359 365 ntBASIC13.52□□□□□ -0.25
CLUP10909 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.52□□□□□ -0.25
CLUP10909 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.52□□□□□ -0.25
CLUP10909 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLUP10909 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.52□□□□□ -0.25
CLUP10909 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CLUP10909 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLUP10909 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.52□□□□□ -0.25
CLUP10909 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.52□□□□□ -0.25
CLUP10909 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.52□□□□□ -0.25
CLUP10909 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CLUP10909 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLUP10909 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms