Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLPXO76031 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLPXO76031 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLPXO76031 CNN2P11-201ENST00000429351 262 ntBASIC13.65□□□□□ -0.22
CLPXO76031 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLPXO76031 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
CLPXO76031 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.65□□□□□ -0.22
CLPXO76031 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLPXO76031 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CLPXO76031 AC112191.1-201ENST00000523689 701 ntBASIC13.65□□□□□ -0.22
CLPXO76031 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLPXO76031 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.65□□□□□ -0.22
CLPXO76031 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.65□□□□□ -0.22
CLPXO76031 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.65□□□□□ -0.22
CLPXO76031 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CLPXO76031 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CLPXO76031 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.65□□□□□ -0.22
CLPXO76031 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CLPXO76031 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
CLPXO76031 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLPXO76031 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLPXO76031 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CLPXO76031 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLPXO76031 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.65□□□□□ -0.22
CLPXO76031 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.65□□□□□ -0.22
CLPXO76031 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLPXO76031 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLPXO76031 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.65□□□□□ -0.22
CLPXO76031 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CLPXO76031 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLPXO76031 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLPXO76031 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.65□□□□□ -0.22
CLPXO76031 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.65□□□□□ -0.22
CLPXO76031 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.65□□□□□ -0.22
CLPXO76031 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
CLPXO76031 AP002761.4-201ENST00000565433 3361 ntBASIC13.65□□□□□ -0.23
CLPXO76031 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CLPXO76031 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CLPXO76031 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLPXO76031 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CLPXO76031 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLPXO76031 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLPXO76031 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLPXO76031 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLPXO76031 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLPXO76031 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLPXO76031 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.64□□□□□ -0.23
CLPXO76031 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.64□□□□□ -0.23
CLPXO76031 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CLPXO76031 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLPXO76031 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
CLPXO76031 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
CLPXO76031 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.64□□□□□ -0.23
CLPXO76031 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.64□□□□□ -0.23
CLPXO76031 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.64□□□□□ -0.23
CLPXO76031 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLPXO76031 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLPXO76031 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CLPXO76031 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLPXO76031 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLPXO76031 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.64□□□□□ -0.23
CLPXO76031 AC002056.1-201ENST00000395613 760 ntBASIC13.64□□□□□ -0.23
CLPXO76031 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLPXO76031 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.64□□□□□ -0.23
CLPXO76031 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLPXO76031 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.64□□□□□ -0.23
CLPXO76031 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLPXO76031 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.64□□□□□ -0.23
CLPXO76031 RFPL4AP1-201ENST00000530883 850 ntBASIC13.64□□□□□ -0.23
CLPXO76031 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CLPXO76031 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.64□□□□□ -0.23
CLPXO76031 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
CLPXO76031 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLPXO76031 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLPXO76031 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLPXO76031 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLPXO76031 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.64□□□□□ -0.23
CLPXO76031 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CLPXO76031 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLPXO76031 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLPXO76031 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.64□□□□□ -0.23
CLPXO76031 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLPXO76031 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLPXO76031 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLPXO76031 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.64□□□□□ -0.23
CLPXO76031 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLPXO76031 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLPXO76031 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.64□□□□□ -0.23
CLPXO76031 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.64□□□□□ -0.23
CLPXO76031 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.64□□□□□ -0.23
CLPXO76031 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLPXO76031 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CLPXO76031 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CLPXO76031 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CLPXO76031 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CLPXO76031 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
CLPXO76031 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.63□□□□□ -0.23
CLPXO76031 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.63□□□□□ -0.23
CLPXO76031 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLPXO76031 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms