Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
COCHO43405 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COCHO43405 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
COCHO43405 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
COCHO43405 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COCHO43405 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
COCHO43405 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COCHO43405 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
COCHO43405 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.31■□□□□ 0.04
COCHO43405 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COCHO43405 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
COCHO43405 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COCHO43405 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
COCHO43405 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COCHO43405 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
COCHO43405 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.31■□□□□ 0.04
COCHO43405 ACTG1P2-201ENST00000415776 1125 ntBASIC15.31■□□□□ 0.04
COCHO43405 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.31■□□□□ 0.04
COCHO43405 ACTG1P11-201ENST00000425411 1125 ntBASIC15.31■□□□□ 0.04
COCHO43405 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.31■□□□□ 0.04
COCHO43405 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.31■□□□□ 0.04
COCHO43405 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.31■□□□□ 0.04
COCHO43405 RN7SL11P-201ENST00000471305 293 ntBASIC15.31■□□□□ 0.04
COCHO43405 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.31■□□□□ 0.04
COCHO43405 AC009779.1-201ENST00000551138 283 ntBASIC15.31■□□□□ 0.04
COCHO43405 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.31■□□□□ 0.04
COCHO43405 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.31■□□□□ 0.04
COCHO43405 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.31■□□□□ 0.04
COCHO43405 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COCHO43405 MIR3619-201ENST00000579667 83 ntBASIC15.31■□□□□ 0.04
COCHO43405 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.31■□□□□ 0.04
COCHO43405 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.31■□□□□ 0.04
COCHO43405 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
COCHO43405 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.31■□□□□ 0.04
COCHO43405 AP001505.2-201ENST00000616815 443 ntBASIC15.31■□□□□ 0.04
COCHO43405 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.31■□□□□ 0.04
COCHO43405 AC068587.10-201ENST00000641210 219 ntBASIC15.31■□□□□ 0.04
COCHO43405 AC138627.1-207ENST00000641560 1006 ntBASIC15.31■□□□□ 0.04
COCHO43405 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.31■□□□□ 0.04
COCHO43405 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COCHO43405 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.31■□□□□ 0.04
COCHO43405 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
COCHO43405 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COCHO43405 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.31■□□□□ 0.04
COCHO43405 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COCHO43405 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.31■□□□□ 0.04
COCHO43405 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COCHO43405 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.31■□□□□ 0.04
COCHO43405 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COCHO43405 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
COCHO43405 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
COCHO43405 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COCHO43405 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COCHO43405 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.31■□□□□ 0.04
COCHO43405 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COCHO43405 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
COCHO43405 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
COCHO43405 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COCHO43405 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
COCHO43405 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COCHO43405 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COCHO43405 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
COCHO43405 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COCHO43405 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COCHO43405 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COCHO43405 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.3■□□□□ 0.04
COCHO43405 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.3■□□□□ 0.04
COCHO43405 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.3■□□□□ 0.04
COCHO43405 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
COCHO43405 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COCHO43405 AL662890.1-201ENST00000396818 632 ntBASIC15.3■□□□□ 0.04
COCHO43405 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.3■□□□□ 0.04
COCHO43405 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.3■□□□□ 0.04
COCHO43405 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.3■□□□□ 0.04
COCHO43405 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COCHO43405 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.3■□□□□ 0.04
COCHO43405 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
COCHO43405 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
COCHO43405 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COCHO43405 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.3■□□□□ 0.04
COCHO43405 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.3■□□□□ 0.04
COCHO43405 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
COCHO43405 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
COCHO43405 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COCHO43405 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.3■□□□□ 0.04
COCHO43405 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COCHO43405 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COCHO43405 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COCHO43405 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.29■□□□□ 0.04
COCHO43405 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COCHO43405 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.29■□□□□ 0.04
COCHO43405 AC139712.1-201ENST00000378256 1875 ntBASIC15.29■□□□□ 0.04
COCHO43405 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.29■□□□□ 0.04
COCHO43405 AC144522.1-201ENST00000625111 1658 ntBASIC15.29■□□□□ 0.04
COCHO43405 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COCHO43405 TMBIM7P-202ENST00000641474 1516 ntBASIC15.29■□□□□ 0.04
COCHO43405 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
COCHO43405 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COCHO43405 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COCHO43405 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 177 ms