Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 TUBB3P1-201ENST00000405796 1332 ntBASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 GPS2P2-201ENST00000430745 888 ntBASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 SPDYE14P-201ENST00000442619 822 ntBASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV3S1A0A5B6 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 MED15P5-201ENST00000423150 992 ntBASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 KRT18P32-201ENST00000424695 1287 ntBASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 AC005237.2-201ENST00000434368 219 ntBASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 DUX4L47-201ENST00000566374 394 ntBASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 AC022145.2-201ENST00000598203 171 ntBASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 AC027601.4-201ENST00000611259 610 ntBASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 FAM197Y3-203ENST00000618346 717 ntBASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms