Protein–RNA interactions for Protein: Q9UBE8

NLK, Serine/threonine-protein kinase NLK, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLKQ9UBE8 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NLKQ9UBE8 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NLKQ9UBE8 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NLKQ9UBE8 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NLKQ9UBE8 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NLKQ9UBE8 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NLKQ9UBE8 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NLKQ9UBE8 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NLKQ9UBE8 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.37□□□□□ -0.27
NLKQ9UBE8 AZGP1P1-201ENST00000411909 902 ntBASIC13.37□□□□□ -0.27
NLKQ9UBE8 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.37□□□□□ -0.27
NLKQ9UBE8 SERBP1P3-201ENST00000459980 809 ntBASIC13.37□□□□□ -0.27
NLKQ9UBE8 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.37□□□□□ -0.27
NLKQ9UBE8 HLA-V-204ENST00000476601 1289 ntBASIC13.37□□□□□ -0.27
NLKQ9UBE8 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NLKQ9UBE8 AC140878.1-201ENST00000565277 250 ntBASIC13.37□□□□□ -0.27
NLKQ9UBE8 AC051619.7-201ENST00000568314 623 ntBASIC13.37□□□□□ -0.27
NLKQ9UBE8 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.37□□□□□ -0.27
NLKQ9UBE8 AC073592.8-201ENST00000624126 511 ntBASIC13.37□□□□□ -0.27
NLKQ9UBE8 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NLKQ9UBE8 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.37□□□□□ -0.27
NLKQ9UBE8 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NLKQ9UBE8 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
NLKQ9UBE8 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.37□□□□□ -0.27
NLKQ9UBE8 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NLKQ9UBE8 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.37□□□□□ -0.27
NLKQ9UBE8 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.37□□□□□ -0.27
NLKQ9UBE8 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NLKQ9UBE8 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NLKQ9UBE8 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
NLKQ9UBE8 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
NLKQ9UBE8 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NLKQ9UBE8 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NLKQ9UBE8 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
NLKQ9UBE8 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NLKQ9UBE8 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
NLKQ9UBE8 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NLKQ9UBE8 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NLKQ9UBE8 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
NLKQ9UBE8 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.36□□□□□ -0.27
NLKQ9UBE8 CICP11-201ENST00000434745 2827 ntBASIC13.36□□□□□ -0.27
NLKQ9UBE8 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.36□□□□□ -0.27
NLKQ9UBE8 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.36□□□□□ -0.27
NLKQ9UBE8 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NLKQ9UBE8 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.36□□□□□ -0.27
NLKQ9UBE8 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NLKQ9UBE8 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NLKQ9UBE8 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NLKQ9UBE8 AC023090.2-201ENST00000625182 2110 ntBASIC13.36□□□□□ -0.27
NLKQ9UBE8 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.36□□□□□ -0.27
NLKQ9UBE8 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NLKQ9UBE8 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
NLKQ9UBE8 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NLKQ9UBE8 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
NLKQ9UBE8 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.36□□□□□ -0.27
NLKQ9UBE8 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.36□□□□□ -0.27
NLKQ9UBE8 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NLKQ9UBE8 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
NLKQ9UBE8 AL080243.2-201ENST00000418783 582 ntBASIC13.36□□□□□ -0.27
NLKQ9UBE8 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NLKQ9UBE8 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.36□□□□□ -0.27
NLKQ9UBE8 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.36□□□□□ -0.27
NLKQ9UBE8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.36□□□□□ -0.27
NLKQ9UBE8 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.36□□□□□ -0.27
NLKQ9UBE8 SPDYE12P-201ENST00000618416 771 ntBASIC13.36□□□□□ -0.27
NLKQ9UBE8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.36□□□□□ -0.27
NLKQ9UBE8 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NLKQ9UBE8 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NLKQ9UBE8 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NLKQ9UBE8 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.36□□□□□ -0.27
NLKQ9UBE8 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NLKQ9UBE8 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.36□□□□□ -0.27
NLKQ9UBE8 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.36□□□□□ -0.27
NLKQ9UBE8 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.36□□□□□ -0.27
NLKQ9UBE8 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.36□□□□□ -0.27
NLKQ9UBE8 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
NLKQ9UBE8 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NLKQ9UBE8 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NLKQ9UBE8 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
NLKQ9UBE8 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NLKQ9UBE8 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.36□□□□□ -0.27
NLKQ9UBE8 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NLKQ9UBE8 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NLKQ9UBE8 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NLKQ9UBE8 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NLKQ9UBE8 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
NLKQ9UBE8 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NLKQ9UBE8 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.36□□□□□ -0.27
NLKQ9UBE8 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NLKQ9UBE8 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NLKQ9UBE8 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.35□□□□□ -0.27
NLKQ9UBE8 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
NLKQ9UBE8 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NLKQ9UBE8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.35□□□□□ -0.27
NLKQ9UBE8 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms