Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 RN7SL832P-201ENST00000607781 1756 ntBASIC14.15□□□□□ -0.14
VAPAQ9P0L0 KRT8P24-201ENST00000560290 1559 ntBASIC14.15□□□□□ -0.14
VAPAQ9P0L0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 AC020910.6-201ENST00000623084 1459 ntBASIC14.15□□□□□ -0.14
VAPAQ9P0L0 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 MIR943-201ENST00000401286 94 ntBASIC14.15□□□□□ -0.14
VAPAQ9P0L0 AL139094.1-201ENST00000405549 1188 ntBASIC14.15□□□□□ -0.14
VAPAQ9P0L0 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 AC093813.1-201ENST00000605066 256 ntBASIC14.15□□□□□ -0.14
VAPAQ9P0L0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 MYADML-201ENST00000474610 2147 ntBASIC14.15□□□□□ -0.14
VAPAQ9P0L0 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 AC130686.1-201ENST00000622936 2466 ntBASIC14.15□□□□□ -0.14
VAPAQ9P0L0 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAPAQ9P0L0 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.14□□□□□ -0.15
VAPAQ9P0L0 CICP17-201ENST00000418553 2377 ntBASIC14.14□□□□□ -0.15
VAPAQ9P0L0 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 FAM86GP-201ENST00000448322 971 ntBASIC14.14□□□□□ -0.15
VAPAQ9P0L0 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 AC026434.2-201ENST00000506094 1078 ntBASIC14.14□□□□□ -0.15
VAPAQ9P0L0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms