Protein–RNA interactions for Protein: Q9NQC7

CYLD, Ubiquitin carboxyl-terminal hydrolase CYLD, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYLDQ9NQC7 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CYLDQ9NQC7 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CYLDQ9NQC7 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.82■□□□□ 0.12
CYLDQ9NQC7 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CYLDQ9NQC7 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CYLDQ9NQC7 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CYLDQ9NQC7 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.82■□□□□ 0.12
CYLDQ9NQC7 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CYLDQ9NQC7 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CYLDQ9NQC7 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.82■□□□□ 0.12
CYLDQ9NQC7 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.82■□□□□ 0.12
CYLDQ9NQC7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CYLDQ9NQC7 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CYLDQ9NQC7 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.82■□□□□ 0.12
CYLDQ9NQC7 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.82■□□□□ 0.12
CYLDQ9NQC7 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.82■□□□□ 0.12
CYLDQ9NQC7 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.82■□□□□ 0.12
CYLDQ9NQC7 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CYLDQ9NQC7 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CYLDQ9NQC7 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CYLDQ9NQC7 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.82■□□□□ 0.12
CYLDQ9NQC7 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 AP000593.2-201ENST00000542775 1433 ntBASIC15.81■□□□□ 0.12
CYLDQ9NQC7 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 Z99916.3-201ENST00000623422 1080 ntBASIC15.81■□□□□ 0.12
CYLDQ9NQC7 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYLDQ9NQC7 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CYLDQ9NQC7 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
CYLDQ9NQC7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CYLDQ9NQC7 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CYLDQ9NQC7 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CYLDQ9NQC7 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CYLDQ9NQC7 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.8■□□□□ 0.12
CYLDQ9NQC7 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CYLDQ9NQC7 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CYLDQ9NQC7 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CYLDQ9NQC7 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CYLDQ9NQC7 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CYLDQ9NQC7 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CYLDQ9NQC7 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.8■□□□□ 0.12
CYLDQ9NQC7 MIR1202-201ENST00000408529 83 ntBASIC15.8■□□□□ 0.12
CYLDQ9NQC7 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.8■□□□□ 0.12
CYLDQ9NQC7 AL355994.2-201ENST00000447882 704 ntBASIC15.8■□□□□ 0.12
CYLDQ9NQC7 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.8■□□□□ 0.12
CYLDQ9NQC7 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.8■□□□□ 0.12
CYLDQ9NQC7 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.8■□□□□ 0.12
CYLDQ9NQC7 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CYLDQ9NQC7 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.8■□□□□ 0.12
CYLDQ9NQC7 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.8■□□□□ 0.12
CYLDQ9NQC7 AC010328.2-201ENST00000597698 1111 ntBASIC15.8■□□□□ 0.12
CYLDQ9NQC7 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.8■□□□□ 0.12
CYLDQ9NQC7 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CYLDQ9NQC7 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CYLDQ9NQC7 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CYLDQ9NQC7 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CYLDQ9NQC7 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CYLDQ9NQC7 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.8■□□□□ 0.12
CYLDQ9NQC7 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CYLDQ9NQC7 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms