Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 AL049840.4-201ENST00000602422 811 ntBASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 AC093028.1-201ENST00000622998 982 ntBASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
POLR2J3Q9H1A7 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.87□□□□□ -0.19
POLR2J3Q9H1A7 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms