Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 AC009407.1-201ENST00000568958 598 ntBASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 AC004461.2-201ENST00000629517 803 ntBASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 AC018665.1-201ENST00000622927 1362 ntBASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 MIR600HG-201ENST00000449175 5984 ntBASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 BTBD7P1-201ENST00000447253 1453 ntBASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 GAPDHP40-201ENST00000505218 1006 ntBASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 AC022447.6-201ENST00000515522 438 ntBASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.03□□□□□ -0.16
AMBRA1Q9C0C7 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AMBRA1Q9C0C7 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
AMBRA1Q9C0C7 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
AMBRA1Q9C0C7 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
AMBRA1Q9C0C7 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
AMBRA1Q9C0C7 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
AMBRA1Q9C0C7 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
AMBRA1Q9C0C7 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.02□□□□□ -0.16
AMBRA1Q9C0C7 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.02□□□□□ -0.16
AMBRA1Q9C0C7 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
AMBRA1Q9C0C7 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AMBRA1Q9C0C7 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.02□□□□□ -0.16
AMBRA1Q9C0C7 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
AMBRA1Q9C0C7 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AMBRA1Q9C0C7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.02□□□□□ -0.16
AMBRA1Q9C0C7 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms